RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 NOL4LQ96MY1 436 aaPredicted RBP15.42■□□□□ 0.06
PRKCB-202ENST00000321728 PTRH2Q9Y3E5 179 aaKnown RBP15.42■□□□□ 0.06
PRKCB-202ENST00000321728 DHHO43323 396 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 RPS18P62269 152 aaKnown RBP15.41■□□□□ 0.06
PRKCB-202ENST00000321728 ID3Q02535 119 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 EXT1Q16394 746 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 ZNF818PQ6ZRF7 136 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 ABHD14BQ96IU4 210 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 RSG1Q9BU20 258 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 CDH20Q9HBT6 801 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 RPRMQ9NS64 109 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 TRAV1-1A0A0B4J248 108 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 NRASP01111 189 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 APLNRP35414 380 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 MRPS34P82930 218 aaKnown RBP15.41■□□□□ 0.06
PRKCB-202ENST00000321728 COL10A1Q03692 680 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 ZFP36L1Q07352 338 aaKnown RBP15.41■□□□□ 0.06
PRKCB-202ENST00000321728 WDR25Q64LD2 544 aaPredicted RBP15.41■□□□□ 0.06
PRKCB-202ENST00000321728 WDR5BQ86VZ2 330 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 NECAP1Q8NC96 275 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 OR1P1Q8NH06 330 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 NDUFAF3Q9BU61 184 aa15.41■□□□□ 0.06
PRKCB-202ENST00000321728 NPIPA2E9PIF3 369 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 NPIPA3F8WFD2 350 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 DFFBO76075 338 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 CD55P08174 381 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 VDAC1P21796 283 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 TMEM267Q0VDI3 215 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-202ENST00000321728 C10orf128Q5T292 105 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 TMEM211Q6ICI0 200 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 CDCA3Q99618 268 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-202ENST00000321728 OR14J1Q9UGF5 321 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 XKRY2A2RUG3 117 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 CEBPZOSA8MTT3 80 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 TK1P04183 234 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 HIST1H3AP68431 136 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 OR8B8Q15620 311 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 ADIRFQ15847 76 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 NMSQ5H8A3 153 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 PRAMEF20Q5VT98 475 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 PLXDC1Q8IUK5 500 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 RNASEH2CQ8TDP1 164 aaKnown RBP15.4■□□□□ 0.06
PRKCB-202ENST00000321728 RAB24Q969Q5 203 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 ZNF837Q96EG3 531 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-202ENST00000321728 NEU1Q99519 415 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 VSIRQ9H7M9 311 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 IGHV1OR21-1A0A087WYE8 117 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 TCEAL6Q6IPX3 200 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 ASCL4Q6XD76 172 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 C17orf82Q86X59 251 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-202ENST00000321728 PLPPR1Q8TBJ4 325 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 SCGB1C1Q8TD33 95 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 DDA1Q9BW61 102 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 ULBP2Q9BZM5 246 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 HIPK2Q9H2X6 1198 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 MTCH2Q9Y6C9 303 aa15.4■□□□□ 0.06
PRKCB-202ENST00000321728 LOC102725191A0A1B0GVB3 256 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 PAX9P55771 341 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 CA5BP1Q8WTZ4 195 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 TMEM54Q969K7 222 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 HIST1H2AAQ96QV6 131 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 ACTR3CQ9C0K3 210 aaPredicted RBP15.39■□□□□ 0.05
PRKCB-202ENST00000321728 CTDSP1Q9GZU7 261 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 SRD5A3Q9H8P0 318 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 PLSCR2Q9NRY7 297 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 LAMP3Q9UQV4 416 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 C2CD4DB7Z1M9 353 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 CD38P28907 300 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 RAB4BP61018 213 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 ZNF774Q6NX45 483 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 MYOTQ9UBF9 498 aa15.39■□□□□ 0.05
PRKCB-202ENST00000321728 IGLV3-32A0A0A0MS00 114 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 CASP6P55212 293 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 RBM11P57052 281 aaKnown RBP15.38■□□□□ 0.05
PRKCB-202ENST00000321728 OR2V1Q8NHB1 315 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 RNF138Q8WVD3 245 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 ZNF501Q96CX3 271 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-202ENST00000321728 UCN2Q96RP3 112 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 ATG101Q9BSB4 218 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 CEACAM6P40199 344 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 NUTF2P61970 127 aaKnown RBP15.38■□□□□ 0.05
PRKCB-202ENST00000321728 P2RY6Q15077 328 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 CLEC12BQ2HXU8 276 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 PLCXD3Q63HM9 321 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 ZNF66Q6ZN08 573 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 PIGCQ92535 297 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 MRPL37Q9BZE1 423 aaKnown RBP15.38■□□□□ 0.05
PRKCB-202ENST00000321728 CCL28Q9NRJ3 127 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 RNF115Q9Y4L5 304 aa15.38■□□□□ 0.05
PRKCB-202ENST00000321728 IGKV1D-13A0A0B4J2D9 117 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 EREGO14944 169 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 DUX1O43812 170 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 IGKV1-13P0DP09 117 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 ERVS71-1P61550 626 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 SLC10A1Q14973 349 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 C16orf82Q7Z2V1 217 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 Q9N2K0 584 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 TAAR3PQ9P1P4 343 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 CLEC18AA5D8T8 446 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 LMO7DNF2Z398 122 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms