RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 OR5H1A6NKK0 313 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF587BE7ETH6 402 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 HSPB6O14558 160 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 MRPL33O75394 65 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 OR2T2Q6IF00 324 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 C5orf24Q7Z6I8 188 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 FRZBQ92765 325 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 EMG1Q92979 244 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 BORCS8Q96FH0 119 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 CDRT15L2A8MXV6 281 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 HSD17B6O14756 317 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 SYNGR3O43761 229 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 P2RY1P47900 373 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 DLK1P80370 383 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 LURAP1Q96LR2 239 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 NEU1Q99519 415 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 FBLN5Q9UBX5 448 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 PCSK5Q92824 1860 aa13.41□□□□□ -0.26
SHROOM1-201ENST00000319854 GEMIN2O14893 280 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 SCGNO76038 276 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 SPCS3P61009 180 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 PLCXD3Q63HM9 321 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 IL22RA1Q8N6P7 574 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 PP6455Q8WZ26 134 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 POM121Q96HA1 1249 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 GPR35Q9HC97 309 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 SLC7A10Q9NS82 523 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 V9GYS6 101 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 CYC1P08574 325 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 UBE2KP61086 200 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 FOXO1Q12778 655 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 RAB35Q15286 201 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 OR1C1Q15619 314 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 TMEM164Q5U3C3 297 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 SULF2Q8IWU5 870 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 NUDT16L1Q9BRJ7 211 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 WNT5BQ9H1J7 359 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 C12orf49Q9H741 205 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 IGHV3-64DA0A0J9YX35 117 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 K7N7A8 449 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 NEURL1O76050 574 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 NRASP01111 189 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 SP9P0CG40 484 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 IL2RGP31785 369 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 RND3P61587 244 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 IGFBP7Q16270 282 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 HIKESHIQ53FT3 197 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 FBXL14Q8N1E6 418 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 CPEB3Q8NE35 698 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF2Q9BSG1 426 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 OR2H1Q9GZK4 316 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 LIME1Q9H400 295 aa13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 C14orf166Q9Y224 244 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF850A8MQ14 1090 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 OTX1P32242 354 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 OR2M7Q8NG81 312 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 KCNE4Q8WWG9 221 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 C2orf88Q9BSF0 95 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 RBFOX3A6NFN3 312 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 TSTD3H0UI37 97 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 M0R296 226 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 PHOX2AO14813 284 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 TNFSF15O95150 251 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 MDKP21741 143 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 CRYGSP22914 178 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 CTSSP25774 331 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 NKX6-1P78426 367 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 SPSB3Q6PJ21 355 aa13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 BOKQ9UMX3 212 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-201ENST00000319854 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 BORCS7-ASMTA0A0B4J1R7 106 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 C5orf49A4QMS7 147 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 TCAPO15273 167 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 IGHEP01854 428 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 TMPRSS7Q7RTY8 843 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 SSC4DQ8WTU2 575 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 SF3B5Q9BWJ5 86 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 DEFB127Q9H1M4 99 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 WASF3Q9UPY6 502 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 LIPGQ9Y5X9 500 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 PAX1P15863 534 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 DUSP1P28562 367 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 DCAF10Q5QP82 559 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 ZFP62Q8NB50 900 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 METTL9Q9H1A3 318 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 ICE1Q9Y2F5 2266 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 IGKV1-12A0A0C4DH73 117 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms