RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 LTC4SQ16873 150 aa12.3□□□□□ -0.44
PABPC1-201ENST00000318607 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
PABPC1-201ENST00000318607 GATAD1Q8WUU5 269 aa12.3□□□□□ -0.44
PABPC1-201ENST00000318607 BOD1Q96IK1 185 aa12.3□□□□□ -0.44
PABPC1-201ENST00000318607 CCNL2Q96S94 520 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-201ENST00000318607 GPR87Q9BY21 358 aa12.3□□□□□ -0.44
PABPC1-201ENST00000318607 OPA3Q9H6K4 179 aa12.3□□□□□ -0.44
PABPC1-201ENST00000318607 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 MPPED1O15442 326 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 CRYAAP02489 173 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 TK1P04183 234 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 IL15RAQ13261 267 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 ICAM4Q14773 271 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 Q5PR19 223 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 TIPARPQ7Z3E1 657 aaKnown RBP12.29□□□□□ -0.44
PABPC1-201ENST00000318607 HIST1H2BLQ99880 126 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 PKDREJQ9NTG1 2253 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 UBE2L5PA0A1B0GUS4 154 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 DCAF7P61962 342 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 TMEM68Q96MH6 324 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 TAAR9Q96RI9 348 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 ZFHX4Q86UP3 3567 aa12.29□□□□□ -0.44
PABPC1-201ENST00000318607 EREGO14944 169 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 IGHV3-7P01780 117 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 SLC23A3Q6PIS1 610 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 OR4F5Q8NH21 305 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 LHX4Q969G2 390 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 OR4F4Q96R69 305 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 EGLN1Q9GZT9 426 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 ERRFI1Q9UJM3 462 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-201ENST00000318607 STRAPQ9Y3F4 350 aaKnown RBP12.28□□□□□ -0.44
PABPC1-201ENST00000318607 PI4KAP42356 2102 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 IGKV1-12A0A0C4DH73 117 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 A0A1B0GX78 115 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 ANKUB1A6NFN9 424 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 K7N7A8 449 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 IGKV1D-12P01611 117 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 GPM6AP51674 278 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 PRR31Q5SQ13 230 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 OSR2Q8N2R0 312 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 SPTSSAQ969W0 71 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 CCDC74BQ96LY2 380 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 PGPEP1LA6NFU8 196 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 TUSC2O75896 110 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 STARD6P59095 220 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 TLE4Q04727 773 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 SPATA46Q5T0L3 261 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 FBXO46Q6PJ61 603 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-201ENST00000318607 ZNF818PQ6ZRF7 136 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 MCEMP1Q8IX19 187 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 HIST1H2AAQ96QV6 131 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 PATZ1Q9HBE1 687 aaKnown RBP12.28□□□□□ -0.44
PABPC1-201ENST00000318607 DKKL1Q9UK85 242 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 MMACHCQ9Y4U1 282 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 PLCE1Q9P212 2302 aa12.28□□□□□ -0.44
PABPC1-201ENST00000318607 THADAQ6YHU6 1953 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 CLDN34H7C241 214 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 DVL1O14640 695 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 ZNF32P17041 273 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 COL10A1Q03692 680 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 SHHQ15465 462 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 SPSB3Q6PJ21 355 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 CCDC71LQ8N9Z2 235 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 OR5B12Q96R08 314 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 CACNA1BQ00975 2339 aa12.27□□□□□ -0.44
PABPC1-201ENST00000318607 A0A1W2PPC4 97 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 KIAA1324LA8MWY0 1029 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-201ENST00000318607 PPP5D1E7EU14 171 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 SLC31A2O15432 143 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 ZDHHC23Q8IYP9 409 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF611Q8N823 705 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 EXTL1Q92935 676 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 GINS3Q9BRX5 216 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 FAM234AQ9H0X4 552 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 POMT1Q9Y6A1 747 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 DHHO43323 396 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 CLDN1O95832 211 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 HOXA4Q00056 320 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-201ENST00000318607 CFHR1Q03591 330 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 ARL6IP1Q15041 203 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 SHBQ15464 509 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF664Q8N3J9 261 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 D2HGDHQ8N465 521 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF808Q8N4W9 903 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-201ENST00000318607 IFI44Q8TCB0 444 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 FAM131CQ96AQ9 280 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 GALNT14Q96FL9 552 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 RBKSQ9H477 322 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 CACNA1HO95180 2353 aa12.27□□□□□ -0.45
PABPC1-201ENST00000318607 SPTA1P02549 2419 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 H7BYZ3 331 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 OR4A8P0C604 315 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 GALNSP34059 522 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms