RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
DDX54-202ENST00000314045 RELL2Q8NC24 303 aaPredicted RBP11.79□□□□□ -0.52
DDX54-202ENST00000314045 SCMH1Q96GD3 660 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 SLC2A9Q9NRM0 540 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 SPRR3Q9UBC9 169 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 TMEM14DPA8MWL7 114 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 S100PP25815 95 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 ELLP55199 621 aaPredicted RBP11.79□□□□□ -0.52
DDX54-202ENST00000314045 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 NSUN5P2Q63ZY6 315 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 OR5M8Q8NGP6 311 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 OR5B12Q96R08 314 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
DDX54-202ENST00000314045 A0A087WV48 116 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 ANKRD34BA5PLL1 514 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 TMEM255AQ5JRV8 349 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 GAPTQ8N292 157 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 PKIBQ9C010 78 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 hCG_38984A0A1B0GV85 526 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 J3QW42 95 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 MPC2O95563 127 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 CECR9P0C854 216 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 COX7A1P24310 79 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 ACKR3P25106 362 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
DDX54-202ENST00000314045 GNPNAT1Q96EK6 184 aaPredicted RBP11.78□□□□□ -0.52
DDX54-202ENST00000314045 KCNIP2Q9NS61 270 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 LGALS8O00214 317 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 HRASP01112 189 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 OR4A8P0C604 315 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 CD80P33681 288 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 NPBWR2P48146 333 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 GFRA1P56159 465 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 MRPS11P82912 194 aaKnown RBP11.78□□□□□ -0.52
DDX54-202ENST00000314045 NAAAQ02083 359 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
DDX54-202ENST00000314045 TBC1D26Q86UD7 250 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 RNF122Q9H9V4 155 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
DDX54-202ENST00000314045 ELF5Q9UKW6 265 aaPredicted RBP11.78□□□□□ -0.52
DDX54-202ENST00000314045 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
DDX54-202ENST00000314045 PPIAL4EA0A075B759 164 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 PPIAL4DF5H284 164 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 PPIAL4FP0DN26 164 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 OR4A4PQ8NGN8 299 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 OR2W1Q9Y3N9 320 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 NPTNQ9Y639 398 aa11.77□□□□□ -0.52
DDX54-202ENST00000314045 H3F3AP84243 136 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 ST8SIA2Q92186 375 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 RPEQ96AT9 228 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 ADGRG7Q96K78 797 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.77□□□□□ -0.53
DDX54-202ENST00000314045 CACNG5Q9UF02 275 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 MED13LQ71F56 2210 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 ST8SIA5O15466 376 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 TMEM182Q6ZP80 229 aaPredicted RBP11.77□□□□□ -0.53
DDX54-202ENST00000314045 C1QL2Q7Z5L3 287 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 SLC35E1Q96K37 410 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 ZNF251Q9BRH9 671 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 COL10A1Q03692 680 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 STUMQ69YW2 141 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 RBMS3Q6XE24 437 aaKnown RBP11.77□□□□□ -0.53
DDX54-202ENST00000314045 GLRX5Q86SX6 157 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 MDS2Q8NDY4 140 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 MARC2Q969Z3 335 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.53
DDX54-202ENST00000314045 OR2H2O95918 312 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 MRGPRGQ86SM5 289 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 ADAD2Q8NCV1 583 aaKnown RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 Q96M66 194 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 RPS10P5Q9NQ39 176 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 IGKV3D-15A0A087WSY6 115 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 C7orf66A4D0T2 115 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 BCL2L11O43521 198 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 FOXG1P55316 489 aaPredicted RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 ZNF529Q6P280 563 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 NR2C2APQ86WQ0 139 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 ZNF485Q8NCK3 441 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 AQP3Q92482 292 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 DIRC2Q96SL1 478 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 REPIN1Q9BWE0 567 aaKnown RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 C1QTNF5Q9BXJ0 243 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A8PA6NJQ4 464 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms