RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CA2P00918 260 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 RNF224P0DH78 156 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 B4GALT1P15291 398 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SKP2Q13309 424 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 FAM74A3Q4VXF1 159 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 KTI12Q96EK9 354 aaPredicted RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 MISP3Q96FF7 219 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 OR6C3Q9NZP0 311 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 DOK5Q9P104 306 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 OR4C46A6NHA9 309 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 CRYAAP02489 173 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 LIFP15018 202 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 TCTAP57738 103 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 DUSP2Q05923 314 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 GAMTQ14353 236 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 LEMD1Q68G75 181 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 CNRIP1Q96F85 164 aaPredicted RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 CNTD2Q9H8S5 307 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 GLRX2Q9NS18 164 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SPTA1P02549 2419 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 FRG2CA6NGY1 282 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 FCGR3BO75015 233 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SP1P08047 785 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SLC25A1P53007 311 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 DSCR4P56555 118 aaPredicted RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 TMEM255AQ5JRV8 349 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 ZNF343Q6P1L6 599 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 WFDC8Q8IUA0 241 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SLC22A18ASQ8N1D0 253 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 C4orf45Q96LM5 186 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SH2D2AQ9NP31 389 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 NCOR1O75376 2440 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 ARID1BQ8NFD5 2236 aaPredicted RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 TMEM30CPA0ZSE6 113 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 H3BMH7 237 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 NKX2-8O15522 239 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 RPS4Y1P22090 263 aaKnown RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 FNDC7Q5VTL7 733 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 ZNF600Q6ZNG1 722 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 MSRB3Q8IXL7 192 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 OR4A4PQ8NGN8 299 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 CHAC2Q8WUX2 184 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 CA10Q9NS85 328 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 TPRP12270 2363 aaKnown RBP7.21□□□□□ -1.25
VPS41-202ENST00000310301 A0A087WUJ7 227 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 ERVH48-1M5A8F1 160 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 CORTO00230 105 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 MESP2Q0VG99 397 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 TEX29Q8N6K0 151 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 HES7Q9BYE0 225 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 TMEM140Q9NV12 185 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 NEU3Q9UQ49 428 aa7.21□□□□□ -1.25
VPS41-202ENST00000310301 OR2T8A6NH00 312 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.26
VPS41-202ENST00000310301 GCGP01275 180 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 MELTFP08582 738 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 OR3A1P47881 315 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 B4GALNT1Q00973 533 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 ZNF79Q15937 498 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 ATP23Q9Y6H3 246 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 A0A1W2PR80 420 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 DHHO43323 396 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 TRGC2P03986 189 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 LINC00271P0C7V0 271 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 CXCL2P19875 107 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 HERVK_113P61574 105 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 PAFAH1B2P68402 229 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 KLF9Q13886 244 aaPredicted RBP7.21□□□□□ -1.26
VPS41-202ENST00000310301 SPSB1Q96BD6 273 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 OR2A5Q96R48 311 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 DEFB108AA8MXU0 73 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 MUC1P15941 1255 aaPredicted RBP7.21□□□□□ -1.26
VPS41-202ENST00000310301 NPY1RP25929 384 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 RPS4XP62701 263 aaKnown RBP7.21□□□□□ -1.26
VPS41-202ENST00000310301 SLC25A42Q86VD7 318 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 KISS1RQ969F8 398 aaPredicted RBP7.21□□□□□ -1.26
VPS41-202ENST00000310301 VWCEQ96DN2 955 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 HSPB9Q9BQS6 159 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 DOCK5Q9H7D0 1870 aa7.21□□□□□ -1.26
VPS41-202ENST00000310301 RIF1Q5UIP0 2472 aaKnown RBP7.21□□□□□ -1.26
VPS41-202ENST00000310301 EP300Q09472 2414 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 A0A0A6YYD5 115 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 CHST1O43916 411 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 PAGE4O60829 102 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 CTSDP07339 412 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 SOX8P57073 446 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 RAE1P78406 368 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 IFITM3Q01628 133 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 TSPO2Q5TGU0 170 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 SPACA3Q8IXA5 215 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 C5orf17Q8NAS9 161 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 MRGPRX4Q96LA9 322 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 TMEM56Q96MV1 263 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 CLEC5AQ9NY25 188 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 LANCL1O43813 399 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 EPPINO95925 133 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 ACTL6AO96019 429 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 FGF2P09038 288 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 CD40P25942 277 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms