RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 VSIG10L2P0DP72 767 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 TNFRSF1AP19438 455 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ANXA7P20073 488 aaKnown RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 OR3A1P47881 315 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 MECP2P51608 486 aaKnown RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 RAG2P55895 527 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 RBM39Q14498 530 aaKnown RBP5.83□□□□□ -1.48
PTCD2-201ENST00000308077 CDK10Q15131 360 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 CHRFAM7AQ494W8 412 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 SHEQ5VZ18 495 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF880Q6PDB4 577 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF497Q6ZNH5 498 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 Q6ZS49 121 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 AKAP14Q86UN6 197 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 LHFPL1Q86WI0 220 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 FAM90A1Q86YD7 464 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 GAPTQ8N292 157 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ARRDC1Q8N5I2 433 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 PPP1R14BQ96C90 147 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 PRRT1Q99946 306 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 SHARPINQ9H0F6 387 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 LIME1Q9H400 295 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 SAP30LQ9HAJ7 183 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF286AQ9HBT8 521 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 DNAJB11Q9UBS4 358 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 SCP2D1Q9UJQ7 156 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF221Q9UK13 617 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 NPTNQ9Y639 398 aa5.83□□□□□ -1.48
PTCD2-201ENST00000308077 TRAV39A0A0B4J263 110 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 HMX3A6NHT5 357 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 IFNL4K9M1U5 179 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF737O75373 536 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DHFRP00374 187 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 CD8AP01732 235 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 HPXP02790 462 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 IFNA6P05013 189 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 RCC1P18754 421 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 PRDX2P32119 198 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 MDH2P40926 338 aaKnown RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 OR3A3P47888 321 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 ARPC4P59998 168 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 HERPUD1Q15011 391 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 ZMYND11Q15326 602 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SRSF7Q16629 238 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 IGSF11Q5DX21 431 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 ATPAF1Q5TC12 328 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 AADACL3Q5VUY0 350 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 ZNF660Q6AZW8 331 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 C11orf71Q6IPW1 123 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SLC36A1Q7Z2H8 476 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DRAXINQ8NBI3 349 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 ANGPTL6Q8NI99 470 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 COQ2Q96H96 371 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 FYTTD1Q96QD9 318 aaKnown RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SEC22CQ9BRL7 303 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 GHITMQ9H3K2 345 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 MS4A5Q9H3V2 200 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DECR2Q9NUI1 292 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 GLS2Q9UI32 602 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 IGKV1-6A0A0C4DH72 117 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 A0A1B0GW55 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 OR5H14A6NHG9 310 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 CCNKO75909 580 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 RLN1P04808 185 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SOD3P08294 240 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SCTP09683 121 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DANCRP0C864 163 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L2P0CJ85 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L3P0CJ86 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L4P0CJ87 422 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L5P0CJ88 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L6P0CJ89 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L7P0CJ90 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SELLP14151 372 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 EIF2B2P49770 351 aaKnown RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 NPY4RP50391 375 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 TSPAN5P62079 268 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SNRPD2P62316 118 aaKnown RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 TEX36Q5VZQ5 186 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 STUMQ69YW2 141 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4L9Q6RFH8 374 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 OR52B4Q8NGK2 314 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 OR11L1Q8NGX0 322 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 TERB2Q8NHR7 220 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 MARCH1Q8TCQ1 289 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 CCDC107Q8WV48 283 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 CAPSLQ8WWF8 208 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SLC25A21Q9BQT8 299 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 TMPRSS13Q9BYE2 586 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 EGLN1Q9GZT9 426 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 RIMS4Q9H426 269 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 SEBOXQ9HB31 216 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 RANGRFQ9HD47 186 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-201ENST00000308077 NECAP2Q9NVZ3 263 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 DUX4Q9UBX2 424 aa5.82□□□□□ -1.48
PTCD2-201ENST00000308077 HRNRQ86YZ3 2850 aaPredicted RBP5.81□□□□□ -1.48
PTCD2-201ENST00000308077 CEACAM18A8MTB9 384 aa5.81□□□□□ -1.48
PTCD2-201ENST00000308077 TRDCB7Z8K6 153 aa5.81□□□□□ -1.48
PTCD2-201ENST00000308077 TMEM178BH3BS89 294 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms