RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ABCA4P78363 2273 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
PTPN9-201ENST00000306726 TCN2P20062 427 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 RTP5Q14D33 572 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 VAX1Q5SQQ9 334 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 D2HGDHQ8N465 521 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 RFESDQ8TAC1 157 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 SPACA9Q96E40 222 aaPredicted RBP12.62□□□□□ -0.39
PTPN9-201ENST00000306726 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 ZDHHC8Q9ULC8 765 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 IGSF23A1L1A6 192 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 CD300LBA8K4G0 201 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 EIF1BO60739 113 aaKnown RBP12.61□□□□□ -0.39
PTPN9-201ENST00000306726 SCGB1D1O95968 90 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 CHRNA7P36544 502 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 EIF1P41567 113 aaKnown RBP12.61□□□□□ -0.39
PTPN9-201ENST00000306726 QRFPP83859 136 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 IL22RA1Q8N6P7 574 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 HS3ST6Q96QI5 342 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 HSPB2A8KAH6 182 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 CD33P20138 364 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 NAAAQ02083 359 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 EIF3IQ13347 325 aaKnown RBP12.61□□□□□ -0.39
PTPN9-201ENST00000306726 HSPB2Q16082 182 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 PIP4P1Q86T03 277 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 PLEKHA2Q9HB19 425 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 A0A0J9YW62 118 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 IFNL4K9M1U5 179 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 PPYP01298 95 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 TFF1P04155 84 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 FAM189A2Q15884 450 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 LIAT1Q6ZQX7 453 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 Q8WTZ3 238 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 MVB12AQ96EY5 273 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 MRGPRX4Q96LA9 322 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 DNAJB11Q9UBS4 358 aa12.61□□□□□ -0.39
PTPN9-201ENST00000306726 DEFB108AA8MXU0 73 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 GRPP07492 148 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF816Q0VGE8 651 aaPredicted RBP12.6□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 C5orf52A6NGY3 159 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 HEXAP06865 529 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 SMIM6P0DI80 62 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 S100A12P80511 92 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 HGFACQ04756 655 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 ADPRHL1Q8NDY3 354 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF501Q96CX3 271 aaPredicted RBP12.6□□□□□ -0.39
PTPN9-201ENST00000306726 BCL3P20749 454 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 PNLIPRP3Q17RR3 467 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 PSMF1Q92530 271 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 TVP23CQ96ET8 276 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 FAM210BQ96KR6 192 aa12.6□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF732B4DXR9 585 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 CRYAAP02489 173 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 P04436 131 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 CTSDP07339 412 aaPredicted RBP12.59□□□□□ -0.39
PTPN9-201ENST00000306726 CNN3Q15417 329 aaKnown RBP12.59□□□□□ -0.39
PTPN9-201ENST00000306726 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 RPS19BP1Q86WX3 136 aaKnown RBP12.59□□□□□ -0.39
PTPN9-201ENST00000306726 AGBL5Q8NDL9 886 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 A0A087X0M5 115 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 IGKV3D-11A0A0A0MRZ8 115 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 A0A1B0GX30 115 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 CD200P41217 278 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF266Q14584 549 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 PRR31Q5SQ13 230 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 TMEM252Q8N6L7 170 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 LHX4Q969G2 390 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 SMIM7Q9BQ49 75 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 HS3ST3B1Q9Y662 390 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 IGKV1-27A0A075B6S5 117 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 DVL1O14640 695 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 MPPED1O15442 326 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 S100GP29377 79 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 UNQ6494/PRO21346Q6UXR6 183 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 EML6Q6ZMW3 1958 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 C1orf147Q96MC9 270 aaPredicted RBP12.59□□□□□ -0.39
PTPN9-201ENST00000306726 PARD6AQ9NPB6 346 aa12.59□□□□□ -0.39
PTPN9-201ENST00000306726 KIAA1324LA8MWY0 1029 aaPredicted RBP12.58□□□□□ -0.4
PTPN9-201ENST00000306726 C9J4A7 227 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 P2RY1P47900 373 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 OR4F5Q8NH21 305 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms