RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CGB7P0DN87 165 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 NFYBP25208 207 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 TMEM219Q86XT9 240 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 OR13A1Q8NGR1 328 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 PLPPR1Q8TBJ4 325 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 KIRREL1Q96J84 757 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 VCX3BQ9H321 246 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 MRPS28Q9Y2Q9 187 aaKnown RBP21.29■■□□□ 1
CDKN2A-201ENST00000304494 SIGLEC9Q9Y336 463 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 MGAM2Q2M2H8 2515 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 MAS1P04201 325 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 HLA-DRB5Q30154 266 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 MS4A15Q8N5U1 240 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 NKAIN3Q8N8D7 197 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 MUL1Q969V5 352 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 MRPS24Q96EL2 167 aaKnown RBP21.28■■□□□ 1
CDKN2A-201ENST00000304494 LINC00574Q9H8X3 128 aa21.28■■□□□ 1
CDKN2A-201ENST00000304494 BUB1B-PAK6H3BSN5 160 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 IL1AP01583 271 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 BRS3P32247 399 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 HERPUD1Q15011 391 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 GLIPR1L1Q6UWM5 242 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 Q6ZTK2 550 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 OR10A7Q8NGE5 316 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 OR9G1Q8NH87 305 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 SPACA1Q9HBV2 294 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 IDI2-AS1Q9NZ38 188 aa21.27■■□□□ 1
CDKN2A-201ENST00000304494 MEGF11A6BM72 1044 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A22PA8MWA6 464 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 PIN1P1O15428 100 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 JUNBP17275 347 aaPredicted RBP21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 SPHARQ15513 63 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 ATAD3CQ5T2N8 411 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 AWAT2Q6E213 333 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 Q8N2B8 174 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 MRGPRDQ8TDS7 321 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 PRSS22Q9GZN4 317 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 MMP27Q9H306 513 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 ZNF702PQ9H963 129 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 ZNF581Q9P0T4 197 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 TPRKBQ9Y3C4 175 aa21.26■□□□□ 0.99
CDKN2A-201ENST00000304494 A0A1W2PP11 408 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 TMEM30CPA0ZSE6 113 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 NPIPB11E5RHQ5 1161 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 GZMHP20718 246 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 MYF6P23409 242 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 TPTE2P1Q5T6R2 138 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 CCDC144NLQ6NUI1 221 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 KLHDC1Q8N7A1 406 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 UQCC2Q9BRT2 126 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 MMP28Q9H239 520 aa21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 AMMECR1Q9Y4X0 333 aaPredicted RBP21.25■□□□□ 0.99
CDKN2A-201ENST00000304494 OOSP1A8MZH6 123 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 H0YHG0 523 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 SLC35A2P78381 396 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 RBM39Q14498 530 aaKnown RBP21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 MED22Q15528 200 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 C2orf68Q2NKX9 166 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 ACSM3Q53FZ2 586 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 SLC16A12Q6ZSM3 486 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 C16orf82Q7Z2V1 217 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 NEK7Q8TDX7 302 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 AKR1E2Q96JD6 320 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 ANKRD60Q9BZ19 345 aa21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 LSM2Q9Y333 95 aaKnown RBP21.24■□□□□ 0.99
CDKN2A-201ENST00000304494 ERICH4A6NGS2 130 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 MNDAP41218 407 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 GPR50Q13585 617 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 LYPD6Q86Y78 171 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 OR5M11Q96RB7 305 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 TMED9Q9BVK6 235 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 GHRLQ9UBU3 117 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 KIAA2026Q5HYC2 2103 aa21.23■□□□□ 0.99
CDKN2A-201ENST00000304494 LY6LH3BQJ8 138 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 J3QR06 171 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 VSIG10L2P0DP72 767 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 SSTR5P35346 364 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 HSPA13P48723 471 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 LTC4SQ16873 150 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 UNQ9370/PRO34162Q6UXP9 181 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 RFESDQ8TAC1 157 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 CAPSLQ8WWF8 208 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 LIN7BQ9HAP6 207 aa21.22■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A10PA6NDY2 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A18PA6NE21 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A16PA6NEW6 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A20PA6NIJ5 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A7PA6NKC0 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A12PA8MX19 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A5PA8MXJ8 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A23PA8MXZ1 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 MCRIP1C9JLW8 97 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A15PP0C7V4 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A13PP0C7W8 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A14PP0C7W9 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 FAM90A24PP0C7X0 464 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 IRF3Q14653 427 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 ARSJQ5FYB0 599 aaPredicted RBP21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 UTF1Q5T230 341 aa21.21■□□□□ 0.99
CDKN2A-201ENST00000304494 ZNF497Q6ZNH5 498 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms