RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 DAZAP2Q15038 168 aaPredicted RBP12.16□□□□□ -0.46
RAB40A-201ENST00000304236 IGFBP7Q16270 282 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 C9orf135Q5VTT2 229 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
RAB40A-201ENST00000304236 HAGHLQ6PII5 290 aaPredicted RBP12.16□□□□□ -0.46
RAB40A-201ENST00000304236 LDLRAD3Q86YD5 345 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 COMMD1Q8N668 190 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 GTF3AQ92664 365 aaKnown RBP12.16□□□□□ -0.46
RAB40A-201ENST00000304236 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 HES7Q9BYE0 225 aa12.16□□□□□ -0.46
RAB40A-201ENST00000304236 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 ZNF732B4DXR9 585 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 KLRC4-KLRK1H3BQV0 150 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 FBXO24O75426 580 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 ZNF205O95201 554 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 MUC1P15941 1255 aaPredicted RBP12.15□□□□□ -0.46
RAB40A-201ENST00000304236 GPM6AP51674 278 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 GNMTQ14749 295 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 Q6ZPA2 131 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 OR11L1Q8NGX0 322 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 LYPD6BQ8NI32 183 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 HPSE2Q8WWQ2 592 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 ABHD14BQ96IU4 210 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 POM121L2Q96KW2 1035 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 TMEM222Q9H0R3 208 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 TLNRD1Q9H1K6 362 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 MPC1Q9Y5U8 109 aa12.15□□□□□ -0.46
RAB40A-201ENST00000304236 DUXBA0A1W2PPF3 345 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 TRDCB7Z8K6 153 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 K7EM74 188 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 CD5P06127 495 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 SP1P08047 785 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 IL32P24001 234 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 RAB5CP51148 216 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
RAB40A-201ENST00000304236 Q6ZRG5 221 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 OR4D5Q8NGN0 318 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 ERGIC1Q969X5 290 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 TMEM56Q96MV1 263 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 TMEM56-RWDD3S4R434 201 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 OR5B21A6NL26 309 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 ANKRD30BLA7E2S9 258 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 NME2P1O60361 137 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 TSPAN9O75954 239 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 APLNRP35414 380 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 KCNJ3P48549 501 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 MEOX1P50221 254 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
RAB40A-201ENST00000304236 IGSF11Q5DX21 431 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 LINC00696Q6ZRV3 163 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 FGF23Q9GZV9 251 aaPredicted RBP12.14□□□□□ -0.47
RAB40A-201ENST00000304236 TMEM231Q9H6L2 316 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 UBE2J1Q9Y385 318 aaPredicted RBP12.14□□□□□ -0.47
RAB40A-201ENST00000304236 SHANK1Q9Y566 2161 aa12.14□□□□□ -0.47
RAB40A-201ENST00000304236 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 H7C2Y5 167 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 CCL2P13500 99 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
RAB40A-201ENST00000304236 GNRHRP30968 328 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 FOXG1P55316 489 aaPredicted RBP12.13□□□□□ -0.47
RAB40A-201ENST00000304236 SLC10A1Q14973 349 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 HMGN3Q15651 99 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 FAM76BQ5HYJ3 339 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF573Q86YE8 665 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 SLC35G3Q8N808 338 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
RAB40A-201ENST00000304236 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 MTCH1Q9NZJ7 389 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 PRELID1Q9Y255 219 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 RCL1Q9Y2P8 373 aaKnown RBP12.13□□□□□ -0.47
RAB40A-201ENST00000304236 STRAPQ9Y3F4 350 aaKnown RBP12.13□□□□□ -0.47
RAB40A-201ENST00000304236 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
RAB40A-201ENST00000304236 TRBV6-6A0A0A6YYG2 114 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 TUSC2O75896 110 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 DANCRP0C864 163 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
RAB40A-201ENST00000304236 TBC1D26Q86UD7 250 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 MDS2Q8NDY4 140 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 NEK7Q8TDX7 302 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 OR5P3Q8WZ94 311 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 FAM96BQ9Y3D0 163 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF503-AS2A6NEH8 195 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 ARGFXA6NJG6 315 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 SPP1P10451 314 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 CD46P15529 392 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 CCL11P51671 97 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms