RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 GCSAMLQ5JQS6 135 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 CLEC18BQ6UXF7 455 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 BHLHA15Q7RTS1 189 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-201ENST00000302528 OR13C6PQ8NH95 151 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 CNRIP1Q96F85 164 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-201ENST00000302528 SCN7AQ01118 1682 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 CTAG2O75638 210 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 ZNF117Q03924 483 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 C16orf82Q7Z2V1 217 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 NT5CQ8TCD5 201 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 ADAMTS17Q8TE56 1095 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 TRDCB7Z8K6 153 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 CHST1O43916 411 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 HBZP02008 142 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 FZD5Q13467 585 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 ASCL5Q7RTU5 278 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 OR10J6PQ8NGY7 276 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 METTL26Q96S19 204 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 LPAR2Q9HBW0 351 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 CDC42EP3Q9UKI2 254 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 CXorf1O96002 111 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 MMDQ15546 238 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 FAM74A3Q4VXF1 159 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 TMEM78Q5T7P6 136 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 ERASQ7Z444 233 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 WDR13Q9H1Z4 485 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 ZFP64Q9NPA5 681 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 TMEM38BQ9NVV0 291 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 HIGD1AQ9Y241 93 aa9.18□□□□□ -0.94
CLIP1-201ENST00000302528 IGHV3-21A0A0B4J1V1 117 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 DAOP14920 347 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 JOSD1Q15040 202 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-201ENST00000302528 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 ACER2Q5QJU3 275 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 MOGAT3Q86VF5 341 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 SLC25A40Q8TBP6 338 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 MEGF10Q96KG7 1140 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 NEURL2Q9BR09 285 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 MS4A7Q9GZW8 240 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-201ENST00000302528 LILRA5A6NI73 299 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 TM4SF4P48230 202 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 C10orf126Q8N4M7 172 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 FAM74A7A6NL05 159 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 CTSDP07339 412 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-201ENST00000302528 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 PKIAP61925 76 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 SLC23A3Q6PIS1 610 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 OR4D9Q8NGE8 314 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 ADAMTS5Q9UNA0 930 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 ZNF205O95201 554 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
CLIP1-201ENST00000302528 TCRBV5S2A0A599 114 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 LMO7DNF2Z398 122 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 DEFB124Q8NES8 71 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 OR2V2Q96R30 315 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 HSF4Q9ULV5 492 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 PATE4P0C8F1 98 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 PMELP40967 661 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 ASB5Q8WWX0 329 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 RND1Q92730 232 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 ZNF665Q9H7R5 613 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 ZNF275Q9NSD4 429 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-201ENST00000302528 RNF7Q9UBF6 113 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 MYO9BQ13459 2157 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 ADAP1O75689 374 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 KBTBD11O94819 623 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 TRA2AQ13595 282 aaKnown RBP eCLIP9.16□□□□□ -0.943e-12■■■■□ 21.3
CLIP1-201ENST00000302528 TSPO2Q5TGU0 170 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 TEPPQ6URK8 271 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-201ENST00000302528 SPAG8Q99932 426 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-201ENST00000302528 A0A0B4J2E0 115 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 A0A1B0GX12 115 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 EML2O95834 649 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 PCMT1P22061 227 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 GALNSP34059 522 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-201ENST00000302528 SIGIRRQ6IA17 410 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 DEGS2Q6QHC5 323 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 MRPL30Q8TCC3 161 aaKnown RBP9.16□□□□□ -0.94
CLIP1-201ENST00000302528 MRGPRX3Q96LB0 322 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 TSPAN32Q96QS1 320 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.16□□□□□ -0.94
CLIP1-201ENST00000302528 ETHE1O95571 254 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 CEACAM5P06731 702 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 GZMHP20718 246 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 CCDC144NLQ6NUI1 221 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 SLC25A42Q86VD7 318 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 RIMKLAQ8IXN7 391 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 OR1L8Q8NGR8 309 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 MBD3L1Q8WWY6 194 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 SOSTQ9BQB4 213 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 RHNO1Q9BSD3 238 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 PCGF1Q9BSM1 259 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms