RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SIGLEC12Q96PQ1 595 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 PLA2G3Q9NZ20 509 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 RALGAPA1Q6GYQ0 2036 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF705FA8MVS1 300 aaPredicted RBP11.23□□□□□ -0.61
TVP23A-201ENST00000299866 IGLV3-1P01715 115 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF705DP0CH99 300 aaPredicted RBP11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF705BP0CI00 300 aaPredicted RBP11.23□□□□□ -0.61
TVP23A-201ENST00000299866 MSR1P21757 451 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 CTHP32929 405 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 BAXQ07812 192 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 IL24Q13007 206 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 MALLQ13021 153 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF818PQ6ZRF7 136 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 OSR2Q8N2R0 312 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 POC1BQ8TC44 478 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 PLK3Q9H4B4 646 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 GOLT1BQ9Y3E0 138 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 MTCH2Q9Y6C9 303 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ASXL3Q9C0F0 2248 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 POU2F2P09086 479 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 NPSP0C0P6 89 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 PAX9P55771 341 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ERVFC1-1P60608 527 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 ID3Q02535 119 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM241Q24JQ0 296 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 BSXQ3C1V8 233 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 PHYHD1Q5SRE7 291 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 REV3LO60673 3130 aa11.23□□□□□ -0.61
TVP23A-201ENST00000299866 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 TLX3O43711 291 aaPredicted RBP11.22□□□□□ -0.61
TVP23A-201ENST00000299866 IGHV4-34P06331 123 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 EXT1Q16394 746 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 DPPA3Q6W0C5 159 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 LMX1AQ8TE12 382 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 DNASE2BQ8WZ79 361 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 OXGR1Q96P68 337 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 FKBP11Q9NYL4 201 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 MYOTQ9UBF9 498 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 IAPPP10997 89 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 ENDOGQ14249 297 aaKnown RBP11.22□□□□□ -0.61
TVP23A-201ENST00000299866 RAB35Q15286 201 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 OR1L3Q8NH93 324 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 OR2V1Q8NHB1 315 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM56Q96MV1 263 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 PPP1R14DQ9NXH3 145 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 A0A1B0GUS0 222 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 A0A1W2PR80 420 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 METTL15P1P0C7V9 234 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 HOXA6P31267 233 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 WNT5AP41221 380 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 PCP4P48539 62 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 BATFQ16520 125 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 DEFB119Q8N690 84 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 PLPPR1Q8TBJ4 325 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 ARHGAP21Q5T5U3 1957 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 THADAQ6YHU6 1953 aa11.22□□□□□ -0.61
TVP23A-201ENST00000299866 HSPB6O14558 160 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF737O75373 536 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 CST2P09228 141 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 VDAC1P21796 283 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 KCNMB1Q16558 191 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 PLPPR5Q32ZL2 321 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.21□□□□□ -0.61
TVP23A-201ENST00000299866 FAM69BQ5VUD6 431 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 MAML2Q8IZL2 1156 aaPredicted RBP11.21□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 METTL7AQ9H8H3 244 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 CBY1Q9Y3M2 126 aa11.21□□□□□ -0.61
TVP23A-201ENST00000299866 MAP1LC3B2A6NCE7 125 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 CD33P20138 364 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 NMSQ5H8A3 153 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.62
TVP23A-201ENST00000299866 C1orf53Q5VUE5 145 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 TMEM170AQ8WVE7 144 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 ACY3Q96HD9 319 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 MAP1LC3BQ9GZQ8 125 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.62
TVP23A-201ENST00000299866 CHD3Q12873 2000 aaKnown RBP11.21□□□□□ -0.62
TVP23A-201ENST00000299866 UNC13CQ8NB66 2214 aa11.21□□□□□ -0.62
TVP23A-201ENST00000299866 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 DLEU1O43261 78 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
TVP23A-201ENST00000299866 PDCD6O75340 191 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 LCATP04180 440 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 CTSSP25774 331 aa11.2□□□□□ -0.62
TVP23A-201ENST00000299866 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
TVP23A-201ENST00000299866 EIF3IQ13347 325 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms