RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FUT9Q9Y231 359 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 KLHDC2Q9Y2U9 406 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 HLA-GP17693 338 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 EIF3IQ13347 325 aaKnown RBP11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PRNTQ86SH4 94 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MDP1Q86V88 176 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SMIM12Q96EX1 92 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 IGHV3-72A0A0B4J1Y9 119 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR5B21A6NL26 309 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CEACAM3P40198 252 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RAC3P60763 192 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 WDR34Q96EX3 536 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MFNGO00587 321 aa11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 P01737 135 aa11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TMEM211Q6ICI0 200 aa11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 LRRC75AQ8NAA5 344 aa11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ST6GAL2Q96JF0 529 aa11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 NAT8Q9UHE5 227 aa11.9□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C9orf40Q8IXQ3 194 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PPP1CCP36873 323 aaKnown RBP11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SCN9AQ15858 1988 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CTSDP07339 412 aaPredicted RBP11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HLA-DRB5Q30154 266 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 THYN1Q9P016 225 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IGKV3D-15A0A087WSY6 115 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IGKV3-15P01624 115 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IER3P46695 156 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SLC35B1P78383 322 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR5R1Q8NH85 324 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HILPDAQ9Y5L2 63 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 LEUTXA8MZ59 168 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RPS4Y2Q8TD47 263 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ADAMTS17Q8TE56 1095 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CBY1Q9Y3M2 126 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
CHRFAM7A-201ENST00000299847 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR10C1Q96KK4 312 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF385AQ96PM9 386 aaKnown RBP11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OPN3Q9H1Y3 402 aaPredicted RBP11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CIDEAO60543 219 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TBX19O60806 448 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PPYP01298 95 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CRISP2P16562 243 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 P2RY1P47900 373 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 BSXQ3C1V8 233 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C19orf35Q6ZS72 473 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR2Y1Q8NGV0 311 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MPC1Q9Y5U8 109 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 A0A1W2PPV9 198 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 COL8A1P27658 744 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TMEM50BP56557 158 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GPX7Q96SL4 187 aaPredicted RBP11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RNF7Q9UBF6 113 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF253O75346 499 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CST2P09228 141 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 P2RX4Q99571 388 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IFT22Q9H7X7 185 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CA10Q9NS85 328 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PRSS50Q9UI38 385 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IL24Q13007 206 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CD300LDQ6UXZ3 194 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR10G8Q8NGN5 311 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 DYNLRB2Q8TF09 96 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RAB33BQ9H082 229 aa11.88□□□□□ -0.51
CHRFAM7A-201ENST00000299847 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TMEM255AQ5JRV8 349 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ASB5Q8WWX0 329 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ELOVL1Q9BW60 279 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR2J1Q9GZK6 312 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 NEU3Q9UQ49 428 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR2T8A6NH00 312 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OGG1O15527 345 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PRSS23O95084 383 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IGKV1D-16P01601 117 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 BGLAPP02818 100 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HMGA2P52926 109 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GAB4Q2WGN9 574 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 LDLRAD3Q86YD5 345 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 DEGS2Q6QHC5 323 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF665Q9H7R5 613 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms