RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ASB16Q96NS5 453 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 ERRFI1Q9UJM3 462 aaPredicted RBP4.93□□□□□ -1.62
CPSF2-201ENST00000298875 KCNK7Q9Y2U2 307 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 WIPI2Q9Y4P8 454 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 LAMB2P55268 1798 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 WDR38Q5JTN6 314 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 KMT5CQ86Y97 462 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 OR13G1Q8NGZ3 307 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 TM4SF19Q96DZ7 209 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 SFRP2Q96HF1 295 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 TSPAN32Q96QS1 320 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 PPIL1Q9Y3C6 166 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 K7EQS6 105 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 CTDSPLO15194 276 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 LANCL1O43813 399 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 HPXP02790 462 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 PRF1P14222 555 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
CPSF2-201ENST00000298875 NOVP48745 357 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 SUCLG1P53597 346 aaKnown RBP4.93□□□□□ -1.62
CPSF2-201ENST00000298875 YBX1P67809 324 aaKnown RBP4.93□□□□□ -1.62
CPSF2-201ENST00000298875 PRR13Q9NZ81 148 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 CLEC1BQ9P126 229 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 MTCH2Q9Y6C9 303 aa4.93□□□□□ -1.62
CPSF2-201ENST00000298875 SHISA7A6NL88 538 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 H7C2G1 150 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 HMGA1P17096 107 aaKnown RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ACVR1Q04771 509 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 AWAT1Q58HT5 328 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 LRRC29Q8WV35 223 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RGP1Q92546 391 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ATRXP46100 2492 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 SEC11BP0C7V7 166 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 NMUP48645 174 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RAE1P78406 368 aaKnown RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 NKG7Q16617 165 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 CCL17Q92583 94 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 PSMG3Q9BT73 122 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 LOC389332A0A1B0GUA5 103 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 A0A1B0GV90 55 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 DHRS7CA6NNS2 312 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 TMPRSS3P57727 454 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 R3HDM4Q96D70 268 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 CDX2Q99626 313 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 C12orf73Q69YU5 71 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 LRRC61Q9BV99 259 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 OPN3Q9H1Y3 402 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 VAX2Q9UIW0 290 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MMP17Q9ULZ9 603 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 QSER1Q2KHR3 1735 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 A0A1B0GTH9 108 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MKRN2OSH3BPM6 223 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 LINC00614P0C842 121 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 APELAP0DMC3 54 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 TNFAIP6P98066 277 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 AESQ08117 197 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RNPS1Q15287 305 aaKnown RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 C5orf17Q8NAS9 161 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MYOZ3Q8TDC0 251 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ADAT3Q96EY9 351 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ST6GAL2Q96JF0 529 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 M0R3E3 92 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 HBZP02008 142 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 HLA-DRB5Q30154 266 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 PAPPA-AS1Q5QFB9 102 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 H1FOOQ8IZA3 346 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RFESDQ8TAC1 157 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 STARD10Q9Y365 291 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 A0A1B0GTL3 188 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 P2RY1P47900 373 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 XAF1Q6GPH4 301 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 C3orf80F5H4A9 247 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 SPINK2P20155 84 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RPL30P62888 115 aaKnown RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MEGF10Q96KG7 1140 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 TCRBV5S1A1TA0A578 114 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ANKRD20A5PA0PJZ0 165 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 EPPINO95925 133 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 IGF2P01344 180 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RPS4Y1P22090 263 aaKnown RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 CEACAM3P40198 252 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MVB12AQ96EY5 273 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MIXL1Q9H2W2 232 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 STRCP1A6NGW2 1772 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 DLEC1Q9Y238 1755 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 A0A0B4J2E0 115 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 A0A1B0GX12 115 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ASPDHA6ND91 283 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MMP9P14780 707 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 EMP1P54849 157 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 RTP5Q14D33 572 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 WIPI1Q5MNZ9 446 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 C16orf82Q7Z2V1 217 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 MRGPRX1Q96LB2 322 aa4.92□□□□□ -1.62
CPSF2-201ENST00000298875 TMEFF2Q9UIK5 374 aaPredicted RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 ZNFX1Q9P2E3 1918 aaKnown RBP4.92□□□□□ -1.62
CPSF2-201ENST00000298875 PTP4A3O75365 173 aa4.91□□□□□ -1.62
CPSF2-201ENST00000298875 HSPB1P04792 205 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms