RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF626Q68DY1 528 aa13.17□□□□□ -0.3
LSM6-201ENST00000296581 RBMS3Q6XE24 437 aaKnown RBP13.17□□□□□ -0.3
LSM6-201ENST00000296581 PDZD9Q8IXQ8 264 aa13.17□□□□□ -0.3
LSM6-201ENST00000296581 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
LSM6-201ENST00000296581 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
LSM6-201ENST00000296581 GLYATL2Q8WU03 294 aa13.17□□□□□ -0.3
LSM6-201ENST00000296581 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
LSM6-201ENST00000296581 OR2AT4A6NND4 320 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 SSNA1O43805 119 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 SIX6O95475 246 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 HES4Q9HCC6 221 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 ANXA10Q9UJ72 324 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 VSIG4Q9Y279 399 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 CEACAM18A8MTB9 384 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 PTBP3O95758 552 aaKnown RBP13.16□□□□□ -0.3
LSM6-201ENST00000296581 FBP1P09467 338 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 DUSP1P28562 367 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 CD200P41217 278 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 SNTB1Q13884 538 aaKnown RBP13.16□□□□□ -0.3
LSM6-201ENST00000296581 Q6P435 159 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 Q6ZPA2 131 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 LHFPL1Q86WI0 220 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 TERB2Q8NHR7 220 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 NARS2Q96I59 477 aaKnown RBP13.16□□□□□ -0.3
LSM6-201ENST00000296581 WFIKKN1Q96NZ8 548 aa13.16□□□□□ -0.3
LSM6-201ENST00000296581 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
LSM6-201ENST00000296581 ADORA2A-AS1P86434 159 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 VHLLQ6RSH7 139 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 TMEM17Q86X19 198 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 CCDC107Q8WV48 283 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
LSM6-201ENST00000296581 SYT3Q9BQG1 590 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 EHFQ9NZC4 300 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 TRAV24A0A0B4J272 114 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 IGHV3-64DA0A0J9YX35 117 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 MCRIP1C9JLW8 97 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 NAPSAO96009 420 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 ZNF146Q15072 292 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 SRSF7Q16629 238 aaKnown RBP eCLIP13.15□□□□□ -0.3
LSM6-201ENST00000296581 PRAMEF6Q5VXH4 476 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 Q6ZS49 121 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 SUMF2Q8NBJ7 301 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 MRPL24Q96A35 216 aaKnown RBP13.15□□□□□ -0.3
LSM6-201ENST00000296581 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
LSM6-201ENST00000296581 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
LSM6-201ENST00000296581 FAM221AA4D161 298 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 NXPH2O95156 264 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 BSPH1Q075Z2 132 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 MPPED2Q15777 294 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 SPIN3Q5JUX0 258 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 WDR82Q6UXN9 313 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 ZNF826PQ6ZT77 177 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 OR2Z1Q8NG97 314 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 FN3KRPQ9HA64 309 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 ZNF286AQ9HBT8 521 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 SDCBPO00560 298 aaPredicted RBP13.14□□□□□ -0.31
LSM6-201ENST00000296581 RP2O75695 350 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 OR4E1P0C645 316 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 SELENOVP59797 346 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 SLC25A42Q86VD7 318 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 OR52B4Q8NGK2 314 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 RNASE6Q93091 150 aaKnown RBP13.14□□□□□ -0.31
LSM6-201ENST00000296581 NGBQ9NPG2 151 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 CA10Q9NS85 328 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
LSM6-201ENST00000296581 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 ZNF729A6NN14 1252 aaPredicted RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 DEGS1O15121 323 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 GPX4P36969 197 aaPredicted RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 RBM39Q14498 530 aaKnown RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 ZFP82Q8N141 532 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 TAAR3PQ9P1P4 343 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 PLCE1Q9P212 2302 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 A6NLC8 198 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 FAM90A27PA6NNH2 459 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 ATXN7O15265 892 aaPredicted RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 CLN5O75503 358 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 ZNF660Q6AZW8 331 aaPredicted RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 LDLRAD3Q86YD5 345 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 CBLN2Q8IUK8 224 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 MUC20Q8N307 709 aaPredicted RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 SPICQ8N5J4 248 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 RIMS4Q9H426 269 aaPredicted RBP13.13□□□□□ -0.31
LSM6-201ENST00000296581 Q9N2K0 584 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
LSM6-201ENST00000296581 ZNF44P15621 663 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms