RNA–Protein interactions for RNA: ENST00000295718.6

PTPRN-201, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRN, Length 3,784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-201ENST00000295718 AGAP20933 346 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 GALR1P47211 349 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 GUSBP11Q6P575 273 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-201ENST00000295718 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 EFNA2O43921 213 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 CCL3P10147 92 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 RAC2P15153 192 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 CRISPLD2Q9H0B8 497 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 OR51I2Q9H344 312 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 STARD10Q9Y365 291 aa12.55□□□□□ -0.4
PTPRN-201ENST00000295718 PRR19A6NJB7 356 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BKO60814 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 CLPSP04118 112 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BJP06899 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 NDUFB7P17568 137 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BOP23527 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BBP33778 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BDP58876 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 ERVFRD-1P60508 538 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BCP62807 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST2H2BEQ16778 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BHQ93079 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BNQ99877 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HIST1H2BMQ99879 126 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 V9GYS6 101 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 FAM166BA8MTA8 275 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 PTBP3O95758 552 aaKnown RBP12.54□□□□□ -0.4
PTPRN-201ENST00000295718 HOXA5P20719 270 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 FAM3BP58499 235 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-201ENST00000295718 ZNF92Q03936 586 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 SPEM2Q0P670 501 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 RTP5Q14D33 572 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 IL17BQ9UHF5 180 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 PSG2P11465 335 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 BCL3P20749 454 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-201ENST00000295718 B3GAT1Q9P2W7 334 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 MRPS17Q9Y2R5 130 aaKnown RBP12.54□□□□□ -0.4
PTPRN-201ENST00000295718 FRMPD3Q5JV73 1810 aa12.54□□□□□ -0.4
PTPRN-201ENST00000295718 KIR2DS1A0A191URI9 304 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 TRDCB7Z8K6 153 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 DEGS1O15121 323 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 GLB1P16278 677 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 GPX4P36969 197 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-201ENST00000295718 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 FUT6P51993 359 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 QRFPP83859 136 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 KIR2DS1Q14954 304 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 SLC25A47Q6Q0C1 308 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 ZNF574Q6ZN55 896 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-201ENST00000295718 SYT13Q7L8C5 426 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 RFESDQ8TAC1 157 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 LYZL4Q96KX0 146 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 PCGF1Q9BSM1 259 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 IGHV1OR15-9A0A0B4J2B8 117 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 SYNGR4O95473 234 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 SOD3P08294 240 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 ZP4Q12836 540 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 TMEM241Q24JQ0 296 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 Q3ZCU0 254 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 FAM78BQ5VT40 261 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 C1orf53Q5VUE5 145 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 OR10A7Q8NGE5 316 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 Q96M66 194 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 KCNIP1Q9NZI2 227 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 HEATR1Q9H583 2144 aaKnown RBP12.53□□□□□ -0.4
PTPRN-201ENST00000295718 PRUNE2Q8WUY3 3088 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
PTPRN-201ENST00000295718 VDAC1P21796 283 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 SUMO3P55854 103 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-201ENST00000295718 BSXQ3C1V8 233 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 KCNIP4Q6PIL6 250 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 TOMM20LQ6UXN7 152 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 TMEM18Q96B42 140 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 BOD1Q96IK1 185 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 RPRMQ9NS64 109 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 IL36RNQ9UBH0 155 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 HS3ST3B1Q9Y662 390 aa12.53□□□□□ -0.4
PTPRN-201ENST00000295718 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.4
PTPRN-201ENST00000295718 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.4
PTPRN-201ENST00000295718 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.4
PTPRN-201ENST00000295718 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.4
PTPRN-201ENST00000295718 NXPH2O95156 264 aa12.52□□□□□ -0.4
PTPRN-201ENST00000295718 ZNF25P17030 456 aaPredicted RBP12.52□□□□□ -0.4
PTPRN-201ENST00000295718 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.4
PTPRN-201ENST00000295718 OR2M3Q8NG83 312 aa12.52□□□□□ -0.4
PTPRN-201ENST00000295718 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.41
PTPRN-201ENST00000295718 GJE1A6NN92 205 aa12.52□□□□□ -0.41
PTPRN-201ENST00000295718 SRP19P09132 144 aaKnown RBP12.52□□□□□ -0.41
PTPRN-201ENST00000295718 PCBD1P61457 104 aa12.52□□□□□ -0.41
PTPRN-201ENST00000295718 PKIAP61925 76 aa12.52□□□□□ -0.41
PTPRN-201ENST00000295718 EDDM3AQ14507 147 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms