RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PRSS44E7EML9 344 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 DANCRP0C864 163 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 SPP1P10451 314 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
CCDC116-201ENST00000292779 NFYBP25208 207 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 DVL1P1P54792 670 aaPredicted RBP12.88□□□□□ -0.35
CCDC116-201ENST00000292779 SRPXP78539 464 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 GNMTQ14749 295 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 HIKESHIQ53FT3 197 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 FAM76BQ5HYJ3 339 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 ZNF695Q8IW36 515 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 MDS2Q8NDY4 140 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 OR5P3Q8WZ94 311 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 KIRREL1Q96J84 757 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
CCDC116-201ENST00000292779 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
CCDC116-201ENST00000292779 IGKV1-6A0A0C4DH72 117 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 H7C2Y5 167 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 CDS2O95674 445 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 WNT5AP41221 380 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 ASCL1P50553 236 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.87□□□□□ -0.35
CCDC116-201ENST00000292779 SELENOHQ8IZQ5 122 aaKnown RBP12.87□□□□□ -0.35
CCDC116-201ENST00000292779 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 TMEM56-RWDD3S4R434 201 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 SPENQ96T58 3664 aaKnown RBP12.87□□□□□ -0.35
CCDC116-201ENST00000292779 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 HSD17B6O14756 317 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 TSPAN15O95858 294 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 FHITP49789 147 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 RND3P61587 244 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
CCDC116-201ENST00000292779 ZNF616Q08AN1 781 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 SLC10A1Q14973 349 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 MIDNQ504T8 468 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 SUMF2Q8NBJ7 301 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 HSD17B11Q8NBQ5 300 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 BOD1Q96IK1 185 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 DEFB127Q9H1M4 99 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 ATP23Q9Y6H3 246 aa12.87□□□□□ -0.35
CCDC116-201ENST00000292779 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 ANKRD30BLA7E2S9 258 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 TUSC2O75896 110 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 CEACAM1P13688 526 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 APLNRP35414 380 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 KIR2DS4P43632 304 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 EWSR1Q01844 656 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC116-201ENST00000292779 KIR2DS1Q14954 304 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 IP6K3Q96PC2 410 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 C11orf1Q9H5F2 150 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 OPA3Q9H6K4 179 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 CDRT15L2A8MXV6 281 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 HS3ST1O14792 307 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 C1QL1O75973 258 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 IL18BPO95998 194 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 SNCAP37840 140 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
CCDC116-201ENST00000292779 CAMLGP49069 296 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 POLR2GP62487 172 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC116-201ENST00000292779 C17orf78Q8N4C9 275 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 LILRB1Q8NHL6 650 aaPredicted RBP12.86□□□□□ -0.35
CCDC116-201ENST00000292779 MRPL30Q8TCC3 161 aaKnown RBP12.86□□□□□ -0.35
CCDC116-201ENST00000292779 AKR1E2Q96JD6 320 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 LUZP4Q9P127 313 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
CCDC116-201ENST00000292779 URB1O60287 2271 aaKnown RBP12.85□□□□□ -0.35
CCDC116-201ENST00000292779 ADAM20O43506 726 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 CLN3Q13286 438 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 IGFBP7Q16270 282 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 VASH2Q86V25 355 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 OR2C3Q8N628 320 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 ZFP62Q8NB50 900 aaPredicted RBP12.85□□□□□ -0.35
CCDC116-201ENST00000292779 OR1K1Q8NGR3 316 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 RDH5Q92781 318 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 MPC1Q9Y5U8 109 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 IGSF23A1L1A6 192 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 WT1P19544 449 aaPredicted RBP12.85□□□□□ -0.35
CCDC116-201ENST00000292779 PPT1P50897 306 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 CXorf66Q5JRM2 361 aaPredicted RBP12.85□□□□□ -0.35
CCDC116-201ENST00000292779 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 OR2T2Q6IF00 324 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 ZNF573Q86YE8 665 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 MAGT1Q9H0U3 335 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 C19orf12Q9NSK7 152 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 MLXQ9UH92 298 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 PRELID3BQ9Y3B1 194 aa12.85□□□□□ -0.35
CCDC116-201ENST00000292779 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
CCDC116-201ENST00000292779 MED19A0JLT2 244 aaPredicted RBP12.84□□□□□ -0.35
CCDC116-201ENST00000292779 ARGFXA6NJG6 315 aa12.84□□□□□ -0.35
CCDC116-201ENST00000292779 OR5B21A6NL26 309 aa12.84□□□□□ -0.35
CCDC116-201ENST00000292779 TNFSF12O43508 249 aa12.84□□□□□ -0.35
CCDC116-201ENST00000292779 SSSCA1O60232 199 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms