RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 NTNG2Q96CW9 530 aa11.13□□□□□ -0.63
ZIC3-201ENST00000287538 ABCA4P78363 2273 aa11.13□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 LYZL6O75951 148 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 EDN3P14138 238 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 CHATP28329 748 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 OPRM1P35372 400 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 OR3A2P47893 321 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 ZNF92Q03936 586 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 OR8G1Q15617 311 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST3H3Q16695 136 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 RPUSD3Q6P087 351 aaKnown RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 POC1AQ8NBT0 407 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 FOXD3Q9UJU5 478 aaPredicted RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 G0S2P27469 103 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 CLDN18P56856 261 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 C6orf201Q7Z4U5 140 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 OR14K1Q8NGZ2 314 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 GALNT14Q96FL9 552 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HDHD3Q9BSH5 251 aaPredicted RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 SCRT1Q9BWW7 348 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 ZNF581Q9P0T4 197 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 OR5H1A6NKK0 313 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 PHOX2AO14813 284 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 DHRS3O75911 302 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 NGFP01138 241 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 CXCL1P09341 107 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 MED12LQ86YW9 2145 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 SUMF2Q8NBJ7 301 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 MUCL1Q96DR8 90 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
ZIC3-201ENST00000287538 OR2H1Q9GZK4 316 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
ZIC3-201ENST00000287538 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 SLC22A20A6NK97 555 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 SFTPCP11686 197 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 MAS1LP35410 378 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 RRADP55042 308 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 RELQ04864 619 aaPredicted RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 CLN3Q13286 438 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 TMEM178AQ8NBL3 297 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 GPR132Q9UNW8 380 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 MEMO1Q9Y316 297 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 LSM5Q9Y4Y9 91 aaKnown RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 COX5BP10606 129 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 ZNF708P17019 499 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 AMY2BP19961 511 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 IDH3GP51553 393 aaPredicted RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 PLP2Q04941 152 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 OR2T2Q6IF00 324 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 Q8WTZ3 238 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 YPEL4Q96NS1 127 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 URM1Q9BTM9 101 aaKnown RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 PBDC1Q9BVG4 233 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 WNT5BQ9H1J7 359 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 C19orf12Q9NSK7 152 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 TRGC2P03986 189 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 TAGLN2P37802 199 aaKnown RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 RBMXP38159 391 aaKnown RBP11.11□□□□□ -0.63
ZIC3-201ENST00000287538 RAB4BP61018 213 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 FAM3AP98173 230 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 TCF15Q12870 199 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 C10orf128Q5T292 105 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 CSNK2A3Q8NEV1 391 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 OR10AD1Q8NGE0 317 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 CPT1CQ8TCG5 803 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 ADGRG7Q96K78 797 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 MOB1AQ9H8S9 216 aa11.11□□□□□ -0.63
ZIC3-201ENST00000287538 CYB5BO43169 146 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 CYTIPO60759 359 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 KNG1P01042 644 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 NRASP01111 189 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 FOXC1Q12948 553 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 RAB35Q15286 201 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 IAH1Q2TAA2 248 aaPredicted RBP11.1□□□□□ -0.63
ZIC3-201ENST00000287538 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms