RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TWIST1Q15672 202 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 C1orf185Q5T7R7 199 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 OR4P4Q8NGL7 312 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 OR10J6PQ8NGY7 276 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 DTD1Q8TEA8 209 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 FAM210BQ96KR6 192 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 PARP12Q9H0J9 701 aaKnown RBP3.59□□□□□ -1.83
SCN3A-201ENST00000283254 MIOXQ9UGB7 285 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 FLVCR2Q9UPI3 526 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 HEATR5BQ9P2D3 2071 aa3.59□□□□□ -1.83
SCN3A-201ENST00000283254 SMPD2O60906 423 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 HYPMO75409 117 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PF4P02776 101 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 CD1BP29016 333 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 AVPR2P30518 371 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 CCR2P41597 374 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 LOXL3P58215 753 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 DHRS2Q13268 280 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 UNQ9370/PRO34162Q6UXP9 181 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 OLIG3Q7RTU3 272 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 MAVSQ7Z434 540 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 OR5A2Q8NGI9 324 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM222BQ8WU58 562 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PTPMT1Q8WUK0 201 aaPredicted RBP3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF714Q96N38 554 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 MS4A10Q96PG2 267 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 NTN4Q9HB63 628 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ARHGEF17Q96PE2 2063 aaPredicted RBP3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PPIAL4EA0A075B759 164 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 A0A0A6YYJ9 748 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PPIAL4DF5H284 164 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PPP1R17O96001 155 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 HPXP02790 462 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PPIAL4FP0DN26 164 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ERVS71-1P61550 626 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 BCDIN3DQ7Z5W3 292 aaKnown RBP3.59□□□□□ -1.84
SCN3A-201ENST00000283254 RPS4Y2Q8TD47 263 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 GALNT14Q96FL9 552 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ABHD1Q96SE0 405 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PRR14Q9BWN1 585 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ANGPTL4Q9BY76 406 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 RNF122Q9H9V4 155 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 PPIAL4AQ9Y536 164 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ABCA3Q99758 1704 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 TLN1Q9Y490 2541 aaKnown RBP3.59□□□□□ -1.84
SCN3A-201ENST00000283254 NCOR2Q9Y618 2525 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 IGHV5-51A0A0C4DH38 117 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A10PA6NDY2 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A18PA6NE21 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A16PA6NEW6 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A20PA6NIJ5 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A8PA6NJQ4 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A7PA6NKC0 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A22PA8MWA6 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A12PA8MX19 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A5PA8MXJ8 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A23PA8MXZ1 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 LEUTXA8MZ59 168 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 RAB29O14966 203 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 CHST1O43916 411 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A15PP0C7V4 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A13PP0C7W8 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A14PP0C7W9 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A24PP0C7X0 464 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 CIRBPQ14011 172 aaKnown RBP3.59□□□□□ -1.84
SCN3A-201ENST00000283254 GGTLC2Q14390 218 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 GUCA2BQ16661 112 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 RNF151Q2KHN1 245 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 STPG1Q5TH74 334 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM215Q68D42 235 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF66Q6ZN08 573 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 ERASQ7Z444 233 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 RAB24Q969Q5 203 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 YIPF6Q96EC8 236 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 TSPAN32Q96QS1 320 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 SLC25A37Q9NYZ2 338 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 NAT8Q9UHE5 227 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 MYO7BQ6PIF6 2116 aa3.59□□□□□ -1.84
SCN3A-201ENST00000283254 COL22A1Q8NFW1 1626 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 NRAPQ86VF7 1730 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TCRBV16S1A1N1A0A5B0 115 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 AHRRA9YTQ3 701 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 C9orf172C9J069 976 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 GEMIN2O14893 280 aaKnown RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CTLA4P16410 223 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 BTF3P20290 206 aaKnown RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 NPY1RP25929 384 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 LIMK1P53667 647 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ALKBH6Q3KRA9 238 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 VWA1Q6PCB0 445 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 FAM214BQ7L5A3 538 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 NECAP1Q8NC96 275 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TINAGL1Q9GZM7 467 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 C20orf27Q9GZN8 174 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TOLLIPQ9H0E2 274 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 FAM53CQ9NYF3 392 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 USP9XQ93008 2570 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 NHSL1Q5SYE7 1610 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TRAV30A0A087WSZ9 112 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 FXYD1O00168 92 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms