RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TMED9Q9BVK6 235 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 FKRPQ9H9S5 495 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 MRPS18CQ9Y3D5 142 aaKnown RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 NUBP2Q9Y5Y2 271 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 CEP192Q8TEP8 1941 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ADAMTS9Q9P2N4 1935 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 SPTBN4Q9H254 2564 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 CNOT1A5YKK6 2376 aaKnown RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 IGHV5-10-1A0A0J9YXX1 117 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 C15orf61A6NNL5 157 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 K7ENP7 123 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 PHYHO14832 338 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SLC2A10O95528 541 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 PMS2P2O95744 297 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 APOC1P02654 83 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 PIRTP0C851 137 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 FOLR1P15328 257 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 TAC1P20366 129 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 IGFBP5P24593 272 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SHC1P29353 583 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 CHRNB4P30926 498 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 BTN3A2P78410 334 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 GAGE5Q13069 117 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 GAGE6Q13070 117 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 GINS1Q14691 196 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 P2RY6Q15077 328 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 TSNQ15631 228 aaKnown RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 LIN52Q52LA3 116 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SIRPB2Q5JXA9 342 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 HIST2H3PS2Q5TEC6 136 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 CYB5R2Q6BCY4 276 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 PEX26Q7Z412 305 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 GLT6D1Q7Z4J2 308 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 CCDC71Q8IV32 467 aaPredicted RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 ZNF567Q8N184 647 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 GAPTQ8N292 157 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 ZNF114Q8NC26 417 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SLC26A10Q8NG04 563 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 OR13D1Q8NGV5 346 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 OR51Q1Q8NH59 317 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SLC37A2Q8TED4 501 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 PATE1Q8WXA2 126 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 ASB17Q8WXJ9 295 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 ASB13Q8WXK3 278 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 YIPF5Q969M3 257 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 CPNE2Q96FN4 548 aaPredicted RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 QKIQ96PU8 341 aaKnown RBP eCLIP3.66□□□□□ -1.82
CD44-202ENST00000278385 ACTR6Q9GZN1 396 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 HOXD1Q9GZZ0 328 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 MIXL1Q9H2W2 232 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 TXNIPQ9H3M7 391 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 METTL17Q9H7H0 456 aaPredicted RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 EXOSC4Q9NPD3 245 aaKnown RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 EXOSC3Q9NQT5 275 aaKnown RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 COMMD9Q9P000 198 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 TMEM181Q9P2C4 612 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SLC2A6Q9UGQ3 507 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 MLXQ9UH92 298 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 ZNF225Q9UK10 706 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 MOKQ9UQ07 419 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 VDAC3Q9Y277 283 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 TRAPPC4Q9Y296 219 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 ZNF256Q9Y2P7 627 aaPredicted RBP3.66□□□□□ -1.82
CD44-202ENST00000278385 PLXNA2O75051 1894 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 SPTBN2O15020 2390 aa3.66□□□□□ -1.82
CD44-202ENST00000278385 CABIN1Q9Y6J0 2220 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 DMXL1Q9Y485 3027 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 IGLV5-45A0A087WSX0 123 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 IGLV5-52A0A0A0MRZ9 124 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 IGHV4-61A0A0C4DH41 118 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 TRBV5-4A0A0C4DH59 114 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 RFPL4AA6NLU0 287 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ZNF705EA8MWA4 302 aaPredicted RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 LINC00587B1AMM8 73 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 PPP5D1E7EU14 171 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 F6UB75 175 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 RFPL4AL1F8VTS6 287 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 KPNA4O00629 521 aaPredicted RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 TCAPO15273 167 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 RP2O75695 350 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 POP7O75817 140 aaKnown RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 CCNKO75909 580 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 S1PR2O95136 353 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 SOX14O95416 240 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 TTC4O95801 387 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 LALBAP00709 142 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 IGHV4-59P01825 116 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 HCKP08631 526 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 FCGR3AP08637 254 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 OR9G9P0C7N8 305 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 PGA4P0DJD7 388 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 PGA3P0DJD8 388 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 MYL12AP19105 171 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 OPRL1P41146 370 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 MARCKSL1P49006 195 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 PAX9P55771 341 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 BIDP55957 195 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms