RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SFTPCP11686 197 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 MMP9P14780 707 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 KCNJ3P48549 501 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 PPT1P50897 306 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 SLC35G3Q8N808 338 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 CLEC18CQ8NCF0 446 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 OR52M1Q8NGK5 317 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 SECTM1Q8WVN6 248 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 HPSE2Q8WWQ2 592 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 GTF3AQ92664 365 aaKnown RBP11.08□□□□□ -0.64
C9orf3-201ENST00000277198 BOD1Q96IK1 185 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 C11orf1Q9H5F2 150 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 MYO18BQ8IUG5 2567 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 BTBD17A6NE02 478 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 OR7C1O76099 320 aaPredicted RBP11.08□□□□□ -0.64
C9orf3-201ENST00000277198 TK1P04183 234 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 EDN3P14138 238 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
C9orf3-201ENST00000277198 GFRA1P56159 465 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 ZNF616Q08AN1 781 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 RHEBQ15382 184 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 MPV17LQ2QL34 196 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 TSPO2Q5TGU0 170 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 DPPA2Q7Z7J5 298 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 OR2C3Q8N628 320 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
C9orf3-201ENST00000277198 SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 RIMS4Q9H426 269 aaPredicted RBP11.08□□□□□ -0.64
C9orf3-201ENST00000277198 ZDHHC8Q9ULC8 765 aa11.08□□□□□ -0.64
C9orf3-201ENST00000277198 RCL1Q9Y2P8 373 aaKnown RBP11.08□□□□□ -0.64
C9orf3-201ENST00000277198 A0A0G2JMM0 328 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 KIR2DS1A0A191URI9 304 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 A0A1W2PPB8 328 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 A0A1W2PRS3 328 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 KIR3DP1A8MWS1 328 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 NAPSAO96009 420 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PRH1P02810 166 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 SERPINA7P05543 415 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PATE4P0C8F1 98 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PTAFRP25105 342 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 GNRHRP30968 328 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 KIR2DS4P43632 304 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 CYB561P49447 251 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 AKR1D1P51857 326 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 FGF12P61328 243 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 EWSR1Q01844 656 aaKnown RBP eCLIP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 TLE1Q04724 770 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 KIR2DS1Q14954 304 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 ACER2Q5QJU3 275 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 SLC25A26Q70HW3 274 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 CALHM1Q8IU99 346 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 SFT2D1Q8WV19 159 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 DYRK2Q92630 601 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 IL22RA2Q969J5 263 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 TP53RKQ96S44 253 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PAPOLGQ9BWT3 736 aaKnown RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 OPA3Q9H6K4 179 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 ESRP2Q9H6T0 727 aaKnown RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PLEKHF2Q9H8W4 249 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 Q9N2K0 584 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 FLNCQ14315 2725 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 CNTRLQ7Z7A1 2325 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 FAM221AA4D161 298 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PITX3O75364 302 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 TRAPPC6AO75865 159 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 RFPL3SP0C7P2 107 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 NKX2-1P43699 371 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 RAB1AP62820 205 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 DAZAP2Q15038 168 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 IGFBP7Q16270 282 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 WIPI1Q5MNZ9 446 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 BRICD5Q6PL45 260 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 LINC00596Q86U02 117 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 ZNF695Q8IW36 515 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 ZNF561Q8N587 486 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 OR1J1Q8NGS3 322 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 OR11L1Q8NGX0 322 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 FGFBP3Q8TAT2 258 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 EIF5A2Q9GZV4 153 aaKnown RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
C9orf3-201ENST00000277198 ZNF552Q9H707 407 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 UNKLQ9H9P5 680 aaKnown RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 BOKQ9UMX3 212 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-201ENST00000277198 DOCK10Q96BY6 2186 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 UBR5O95071 2799 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-201ENST00000277198 K7N7A8 449 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 HSPA12AO43301 675 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 NME2P1O60361 137 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 MRPL33O75394 65 aaKnown RBP11.06□□□□□ -0.64
C9orf3-201ENST00000277198 ITGA3P26006 1051 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 RPL35P42766 123 aaKnown RBP11.06□□□□□ -0.64
C9orf3-201ENST00000277198 NHLH2Q02577 135 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 BAXQ07812 192 aa11.06□□□□□ -0.64
C9orf3-201ENST00000277198 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms