RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 CEBPZOSA8MTT3 80 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 H0Y980 276 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 H7BYZ3 331 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 M0R143 59 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 HOXA6P31267 233 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 SNAI3Q3KNW1 292 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 LCN15Q6UWW0 184 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF66Q6ZN08 573 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 PLPPR1Q8TBJ4 325 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 RBM24Q9BX46 236 aaKnown RBP10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF665Q9H7R5 613 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 LAMP3Q9UQV4 416 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 RNF115Q9Y4L5 304 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 TRBV11-1A0A0K0K1C0 115 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 CNOT4O95628 575 aaKnown RBP10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 SNRPCP09234 159 aaKnown RBP10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 RBM11P57052 281 aaKnown RBP10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 RAB35Q15286 201 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 WDR25Q64LD2 544 aaPredicted RBP10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM42Q69YG0 159 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 BRICD5Q6PL45 260 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 ANKRD37Q7Z713 158 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 CENPVQ7Z7K6 275 aaPredicted RBP10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 BTF3L4Q96K17 158 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 SMIM7Q9BQ49 75 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 NPIPA2E9PIF3 369 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 NPIPA3F8WFD2 350 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 M0QZK8 103 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 GGCTO75223 188 aaKnown RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 GALR1P47211 349 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 PAX9P55771 341 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 HBG1P69891 147 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 HBG2P69892 147 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 ADIRFQ15847 76 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 BSXQ3C1V8 233 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM27BQ5VT28 67 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 C16orf82Q7Z2V1 217 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 C5orf24Q7Z6I8 188 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 GAPTQ8N292 157 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 ANAPC16Q96DE5 110 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF581Q9P0T4 197 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 PIAS3Q9Y6X2 628 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 RP1P56715 2156 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 F5P12259 2224 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 KIR2DS1A0A191URI9 304 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 ATXN7O15265 892 aaPredicted RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 ZFAND5O76080 213 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 CA3P07451 260 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 MDH2P40926 338 aaKnown RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 PTGDSP41222 190 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 KIR2DS4P43632 304 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 ERVFC1-1P60608 527 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 MRPS34P82930 218 aaKnown RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 KIR2DS1Q14954 304 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM41BQ5BJD5 291 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 DTX1Q86Y01 620 aa10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 PARD6GQ9BYG4 376 aaPredicted RBP10.67□□□□□ -0.7
CHMP2B-201ENST00000263780 IGKV1-12A0A0C4DH73 117 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 OR7C1O76099 320 aaPredicted RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 KBTBD11O94819 623 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 IGKV1D-12P01611 117 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 LCATP04180 440 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 SFTPCP11686 197 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 CRYGSP22914 178 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 PAX5Q02548 391 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 RNPS1Q15287 305 aaKnown RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF818PQ6ZRF7 136 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 SHISA6Q6ZSJ9 500 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 KMT5CQ86Y97 462 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 MRPL41Q8IXM3 137 aaKnown RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 OR51G1Q8NGK1 321 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 ULBP2Q9BZM5 246 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF737O75373 536 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 HRASP01112 189 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 HLA-HP01893 362 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 TUBG1P23258 451 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 SRP14P37108 136 aaKnown RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 NUBP1P53384 320 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 CLDN15P56746 228 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 RPS18P62269 152 aaKnown RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM69BQ5VUD6 431 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 CISD2Q8N5K1 135 aaKnown RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF845Q96IR2 970 aaPredicted RBP10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
CHMP2B-201ENST00000263780 THADAQ6YHU6 1953 aa10.65□□□□□ -0.7
CHMP2B-201ENST00000263780 MAP1LC3B2A6NCE7 125 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms