RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TOX3O15405 576 aaPredicted RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 RRP8O43159 456 aaKnown RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 UMODP07911 640 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 DTYMKP23919 212 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 IL13RA2Q14627 380 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 MRPL14Q6P1L8 145 aaKnown RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 OR2H1Q9GZK4 316 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 TMED3Q9Y3Q3 217 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 IGSF23A1L1A6 192 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 BTBD17A6NE02 478 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 H0YL77 283 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 IFNA17P01571 189 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 HEXAP06865 529 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 ZNF266Q14584 549 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 EXT1Q16394 746 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 PYY3Q5JQD4 70 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 ZNF385CQ66K41 422 aaPredicted RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 THNSL2Q86YJ6 484 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 OR10D4PQ8NGN7 298 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 ANGPTL4Q9BY76 406 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 PCED1AQ9H1Q7 454 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 UNKLQ9H9P5 680 aaKnown RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 SIT1Q9Y3P8 196 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 POMT1Q9Y6A1 747 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 ZNF816-ZNF321PA0A0X1KG74 233 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 CHST1O43916 411 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 COX6A1P12074 109 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 RPL23AP62750 156 aaKnown RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 C4orf17Q53FE4 359 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 LCN15Q6UWW0 184 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 MYPOPQ86VE0 399 aaPredicted RBP10.91□□□□□ -0.66
LIG1-201ENST00000263274 NTNG2Q96CW9 530 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 FAM86C1Q9NVL1 165 aa10.91□□□□□ -0.66
LIG1-201ENST00000263274 ASPMQ8IZT6 3477 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 ZNF732B4DXR9 585 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 IAPPP10997 89 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 RBM11P57052 281 aaKnown RBP10.9□□□□□ -0.66
LIG1-201ENST00000263274 TMEM267Q0VDI3 215 aaPredicted RBP10.9□□□□□ -0.66
LIG1-201ENST00000263274 CMTM1Q8IZ96 169 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 MOB3AQ96BX8 217 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 SPIN2AQ99865 258 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 SPIN2BQ9BPZ2 258 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 SMOC1Q9H4F8 434 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 GNG13Q9P2W3 67 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
LIG1-201ENST00000263274 KCNS2Q9ULS6 477 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 STRAPQ9Y3F4 350 aaKnown RBP10.9□□□□□ -0.66
LIG1-201ENST00000263274 RBFOX3A6NFN3 312 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 TRAPPC2LH3BP13 241 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 SLC34A2O95436 690 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 SERPINE2P07093 398 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 OTX1P32242 354 aaPredicted RBP10.9□□□□□ -0.66
LIG1-201ENST00000263274 ZNF818PQ6ZRF7 136 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 MKXQ8IYA7 352 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 TMEM252Q8N6L7 170 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 GALNT14Q96FL9 552 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 SLC25A31Q9H0C2 315 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 HSF4Q9ULV5 492 aa10.9□□□□□ -0.66
LIG1-201ENST00000263274 A0A087X0M5 115 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 A0A1B0GX30 115 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 OR6C6A6NF89 314 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 SLC31A2O15432 143 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 CRYGSP22914 178 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 RHEBQ15382 184 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 SPINK14Q6IE38 97 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 HIST2H3AQ71DI3 136 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 WDR5BQ86VZ2 330 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 IL22RA1Q8N6P7 574 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 BOD1Q96IK1 185 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 GINS3Q9BRX5 216 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 PROK2Q9HC23 129 aa10.9□□□□□ -0.67
LIG1-201ENST00000263274 DOCK10Q96BY6 2186 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 CEP250Q9BV73 2442 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 FAM166BA8MTA8 275 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 H3BQ15 152 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 TCAPO15273 167 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 IGLV3-1P01715 115 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 CST2P09228 141 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 RAB11AP62491 216 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 ARF1P84077 181 aaKnown RBP10.89□□□□□ -0.67
LIG1-201ENST00000263274 SPATA46Q5T0L3 261 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 SAP25Q8TEE9 199 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 PLEKHF2Q9H8W4 249 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
LIG1-201ENST00000263274 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 TRDCB7Z8K6 153 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
LIG1-201ENST00000263274 PCBD1P61457 104 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 RND3P61587 244 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 PRDX4Q13162 271 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 C10orf35Q96D05 121 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 C18orf12Q96KH6 178 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 IMMP1LQ96LU5 166 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 GPR35Q9HC97 309 aa10.89□□□□□ -0.67
LIG1-201ENST00000263274 COL4A2P08572 1712 aa10.88□□□□□ -0.67
LIG1-201ENST00000263274 TMEM265A0A087WTH1 108 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms