RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 GDF9O60383 454 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CYTIPO60759 359 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 PDCD6O75340 191 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CLN3Q13286 438 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CNN3Q15417 329 aaKnown RBP13.69□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF787Q6DD87 383 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 A0A0G2JRQ6 117 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CLDN34H7C241 214 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CDS2O95674 445 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 HNRNPKP61978 463 aaKnown RBP eCLIP13.69□□□□□ -0.22
LMNB1-201ENST00000261366 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 SLC35E3Q7Z769 313 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 LRP11Q86VZ4 500 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 UBALD1Q8TB05 177 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 SPSB1Q96BD6 273 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 GNPNAT1Q96EK6 184 aaPredicted RBP13.69□□□□□ -0.22
LMNB1-201ENST00000261366 ZFAND5O76080 213 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CTSSP25774 331 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 CD27P26842 260 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF92Q03936 586 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 THOC3Q96J01 351 aaKnown RBP13.69□□□□□ -0.22
LMNB1-201ENST00000261366 SMDT1Q9H4I9 107 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 SIRT7Q9NRC8 400 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 NBEAQ8NFP9 2946 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 ELOA3CA0A087WX78 387 aaPredicted RBP13.68□□□□□ -0.22
LMNB1-201ENST00000261366 LOC102723971A0A1B0GUV8 181 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 METTL15P1P0C7V9 234 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF32P17041 273 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF611Q8N823 705 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 OR5L2Q8NGL0 311 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 OR1K1Q8NGR3 316 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 EXTL1Q92935 676 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 C11orf1Q9H5F2 150 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 UCK1Q9HA47 277 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 WASF3Q9UPY6 502 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 TK1P04183 234 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 MMP7P09237 267 aaPredicted RBP13.68□□□□□ -0.22
LMNB1-201ENST00000261366 MSX1P28360 303 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 CASP6P55212 293 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 RTP5Q14D33 572 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF124Q15973 351 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 RPUSD4Q96CM3 377 aaKnown RBP13.68□□□□□ -0.22
LMNB1-201ENST00000261366 SPACA9Q96E40 222 aaPredicted RBP13.68□□□□□ -0.22
LMNB1-201ENST00000261366 SIGLEC12Q96PQ1 595 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 SPIN2AQ99865 258 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 SPIN2BQ9BPZ2 258 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 GPR87Q9BY21 358 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
LMNB1-201ENST00000261366 A0A1W2PR77 199 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 BCAT2O15382 392 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-201ENST00000261366 IFNA5P01569 189 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 G0S2P27469 103 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 P2RY6Q15077 328 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 TESK1Q15569 626 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 C9orf135Q5VTT2 229 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 MAML2Q8IZL2 1156 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-201ENST00000261366 FGFBP3Q8TAT2 258 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 M1APQ8TC57 530 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 RBMXL1Q96E39 390 aaKnown RBP13.67□□□□□ -0.22
LMNB1-201ENST00000261366 ATP5SQ99766 215 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 PLK3Q9H4B4 646 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 UBE2ZQ9H832 354 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-201ENST00000261366 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF732B4DXR9 585 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 SCRG1O75711 98 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-201ENST00000261366 TAS2R60P59551 318 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 COL10A1Q03692 680 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 OR8G1Q15617 311 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 PRR18Q8N4B5 295 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
LMNB1-201ENST00000261366 IFNA10P01566 189 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 CCL2P13500 99 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 OTX1P32242 354 aaPredicted RBP13.66□□□□□ -0.22
LMNB1-201ENST00000261366 RBM11P57052 281 aaKnown RBP13.66□□□□□ -0.22
LMNB1-201ENST00000261366 TAS2R30P59541 319 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 PRSS8Q16651 343 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 SLC25A53Q5H9E4 307 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 IL1F10Q8WWZ1 152 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 A0A1B0GU03 582 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 C9J4A7 227 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 RPL36A-HNRNPH2H7BZ11 118 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 HBE1P02100 147 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 AMBPP02760 352 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 GZMBP10144 247 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 BCL2P10415 239 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 NTF4P34130 210 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 PAX9P55771 341 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 LHFPL2Q6ZUX7 228 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 C17orf82Q86X59 251 aaPredicted RBP13.66□□□□□ -0.22
LMNB1-201ENST00000261366 ADPRHL1Q8NDY3 354 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 OR1F12Q8NHA8 337 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 SNIP1Q8TAD8 396 aaKnown RBP13.66□□□□□ -0.22
LMNB1-201ENST00000261366 TMEM37Q8WXS4 190 aa13.66□□□□□ -0.22
LMNB1-201ENST00000261366 EXPH5Q8NEV8 1989 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms