RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HSD17B6O14756 317 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 EIF3GO75821 320 aaKnown RBP eCLIP13.05□□□□□ -0.32
DDX56-201ENST00000258772 AGAP20933 346 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 VDAC1P21796 283 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 VAMP2P63027 116 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 ID3Q02535 119 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 KIR2DS1Q14954 304 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 TGIF1Q15583 401 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 ODF3L1Q8IXM7 274 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 MKXQ8IYA7 352 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 SNIP1Q8TAD8 396 aaKnown RBP13.05□□□□□ -0.32
DDX56-201ENST00000258772 CD300LFQ8TDQ1 290 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 NEK7Q8TDX7 302 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 SIGLEC12Q96PQ1 595 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 RARRES2Q99969 163 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 LOXL2Q9Y4K0 774 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 A0A1W2PPH5 198 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 GPR37O15354 613 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 NGFP01138 241 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 CELA3AP09093 270 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 CTXN2P0C2S0 81 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 COX5BP10606 129 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 SULT1A1P50225 295 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 CLDN18P56856 261 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 CCL20P78556 96 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 RHEBQ15382 184 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 EIF2S3LQ2VIR3 472 aaKnown RBP13.04□□□□□ -0.32
DDX56-201ENST00000258772 KRBOX4Q5JUW0 171 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 ZFP62Q8NB50 900 aaPredicted RBP13.04□□□□□ -0.32
DDX56-201ENST00000258772 OR2M7Q8NG81 312 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 OR5C1Q8NGR4 320 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 GLRX2Q9NS18 164 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 COL27A1Q8IZC6 1860 aaPredicted RBP13.04□□□□□ -0.32
DDX56-201ENST00000258772 A6NLC8 198 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 HSPA12AO43301 675 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 SYNGR1O43759 233 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 NEURL1O76050 574 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 TMEM50AO95807 157 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 OR5A2Q8NGI9 324 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 FAM173AQ9BQD7 235 aa13.04□□□□□ -0.32
DDX56-201ENST00000258772 ZNF552Q9H707 407 aaPredicted RBP13.04□□□□□ -0.32
DDX56-201ENST00000258772 ZNF703Q9H7S9 590 aaPredicted RBP13.04□□□□□ -0.32
DDX56-201ENST00000258772 FREM2Q5SZK8 3169 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 LAMTOR5O43504 91 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 SS18L1O75177 396 aaPredicted RBP13.03□□□□□ -0.32
DDX56-201ENST00000258772 CST7O76096 145 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 ARG1P05089 322 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 S100A6P06703 90 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
DDX56-201ENST00000258772 CTAG1AP78358 180 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 SPSB3Q6PJ21 355 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 CMTM1Q8IZ96 169 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 DCAF16Q9NXF7 216 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 AHCTF1Q8WYP5 2266 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 ESPL1Q14674 2120 aa13.03□□□□□ -0.32
DDX56-201ENST00000258772 RBFOX3A6NFN3 312 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 CDRT15L2A8MXV6 281 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 CHST1O43916 411 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 MMP9P14780 707 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 RAB5AP20339 215 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 ACP1P24666 158 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 DYNLT3P51808 116 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 RAB1AP62820 205 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 PCSK4Q6UW60 755 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 IL22RA1Q8N6P7 574 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 OR5D13Q8NGL4 314 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.32
DDX56-201ENST00000258772 RIMS4Q9H426 269 aaPredicted RBP13.02□□□□□ -0.32
DDX56-201ENST00000258772 PGLYRP1O75594 196 aaPredicted RBP13.02□□□□□ -0.33
DDX56-201ENST00000258772 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 TMEM217Q8N7C4 229 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 SUMF2Q8NBJ7 301 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 OR8G5Q8NG78 346 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 MRPL30Q8TCC3 161 aaKnown RBP13.02□□□□□ -0.33
DDX56-201ENST00000258772 GTF3AQ92664 365 aaKnown RBP13.02□□□□□ -0.33
DDX56-201ENST00000258772 POM121L2Q96KW2 1035 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 HES7Q9BYE0 225 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 IFT22Q9H7X7 185 aa13.02□□□□□ -0.33
DDX56-201ENST00000258772 hCG_1809904A0A1W2PP81 198 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 A0A1W2PPE2 198 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 A0A1W2PPE3 182 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 A0A1W2PR64 198 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 A0A1W2PRV1 198 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 CD300LBA8K4G0 201 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 H0Y980 276 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 UBE2CO00762 179 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 TNFSF12O43508 249 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 SLC34A2O95436 690 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 SYNGR4O95473 234 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 ZXDAP98168 799 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 BAXQ07812 192 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 IL22RA2Q969J5 263 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 SMOC1Q9H4F8 434 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 B4GALT7Q9UBV7 327 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms