RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IGHV3-7P01780 117 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 FUT5Q11128 374 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 CEACAM21Q3KPI0 293 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 CLRN3Q8NCR9 226 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 TMEM171Q8WVE6 324 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 NUP214P35658 2090 aaPredicted RBP16.55■□□□□ 0.24
PTPRE-201ENST00000254667 PPIAL4EA0A075B759 164 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 A0A1W2PR77 199 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 PPIAL4DF5H284 164 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 PGA4P0DJD7 388 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 PPIAL4FP0DN26 164 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 DYNLT3P51808 116 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 CLEC12BQ2HXU8 276 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 SPINK9Q5DT21 86 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 FA2HQ7L5A8 372 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 NXF2Q9GZY0 626 aaKnown RBP16.55■□□□□ 0.24
PTPRE-201ENST00000254667 GOLT1BQ9Y3E0 138 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 PPIAL4AQ9Y536 164 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 INSIG2Q9Y5U4 225 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 RGS13O14921 159 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 ROM1Q03395 351 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 DOLPP1Q86YN1 238 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 SLC25A22Q9H936 323 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 Q9N2K0 584 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 COL11A1P12107 1806 aaPredicted RBP16.55■□□□□ 0.24
PTPRE-201ENST00000254667 TMPRSS3P57727 454 aa16.55■□□□□ 0.24
PTPRE-201ENST00000254667 CHST1O43916 411 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 RNF212Q495C1 297 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 TEX30Q5JUR7 227 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 CCDC144NLQ6NUI1 221 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 KLHDC2Q9Y2U9 406 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 WIPI2Q9Y4P8 454 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 CELA2AP08217 269 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 LYZP61626 148 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 WNT2BQ93097 391 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 KCNK17Q96T54 332 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 MSL2Q9HCI7 577 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 TRAPPC1Q9Y5R8 145 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 KCNMB2Q9Y691 235 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 ASCC3Q8N3C0 2202 aaKnown RBP16.54■□□□□ 0.24
PTPRE-201ENST00000254667 OPN1MWP04001 364 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 OPN1MW2P0DN77 364 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 OPN1MW3P0DN78 364 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 NANOS3P60323 173 aaKnown RBP16.54■□□□□ 0.24
PTPRE-201ENST00000254667 IGLV3-21P80748 117 aaPredicted RBP16.54■□□□□ 0.24
PTPRE-201ENST00000254667 SLC25A47Q6Q0C1 308 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 DPF1Q92782 380 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 BRWD1Q9NSI6 2320 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 UCP2P55851 309 aa16.54■□□□□ 0.24
PTPRE-201ENST00000254667 DSPPQ9NZW4 1301 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 GATCO43716 136 aaKnown RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 SYNGR1O43759 233 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 FOSL1P15407 271 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 RPS4XP62701 263 aaKnown RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 KLHDC1Q8N7A1 406 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 NOL4LQ96MY1 436 aaPredicted RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 SLC7A10Q9NS82 523 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 MRPL22Q9NWU5 206 aaKnown RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 DNASE2O00115 360 aaPredicted RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 UBE2L3P68036 154 aaKnown RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 RBBP6Q7Z6E9 1792 aaKnown RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 FAM157AC9JC47 383 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 ORM2P19652 201 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 SUMO1P63165 101 aaKnown RBP16.53■□□□□ 0.24
PTPRE-201ENST00000254667 MOGAT2Q3SYC2 334 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 CTHRC1Q96CG8 243 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 COA4Q9NYJ1 87 aa16.53■□□□□ 0.24
PTPRE-201ENST00000254667 NKX2-8O15522 239 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 GALR1P47211 349 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 SULT1A1P50225 295 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 PDPNQ86YL7 162 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 ZNF519Q8TB69 540 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 HARBI1Q96MB7 349 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 ALX4Q9H161 411 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-201ENST00000254667 RGPD3A6NKT7 1758 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-201ENST00000254667 GNG7O60262 68 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 PNRC1Q12796 327 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-201ENST00000254667 RIPPLY2Q5TAB7 128 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 C19orf35Q6ZS72 473 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 MARS2Q96GW9 593 aaKnown RBP16.52■□□□□ 0.24
PTPRE-201ENST00000254667 TREM2Q9NZC2 230 aa16.52■□□□□ 0.24
PTPRE-201ENST00000254667 SLC25A10Q9UBX3 287 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-201ENST00000254667 PRDX2P32119 198 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 FOXL2P58012 376 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 MGAT2Q10469 447 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 ANGPTL6Q8NI99 470 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 BLNKQ8WV28 456 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 ARL2-SNX15V9GYD0 113 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 MGST3O14880 152 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 COX6A1P12074 109 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 FHL5Q5TD97 284 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 ATG2BQ96BY7 2078 aa16.52■□□□□ 0.23
PTPRE-201ENST00000254667 IFNL4K9M1U5 179 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 IL11P20809 199 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 OR5R1Q8NH85 324 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 PGLYRP3Q96LB9 341 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 OPN4Q9UHM6 478 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 TRBV5-5A0A0J9YX44 114 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 TOX4O94842 621 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms