RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PCDHB16Q9NRJ7 776 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 IMPAD1Q9NX62 359 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 CALYQ9NYX4 217 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 KIF25Q9UIL4 384 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 EI24O14681 340 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 DEGS1O15121 323 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 FGF16O43320 207 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 HTR3BO95264 441 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 SNRNP70P08621 437 aaKnown RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 FAM106CPP0CH98 169 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 DBTP11182 482 aaKnown RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 SLC6A1P30531 599 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 GLP1RP43220 463 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 THBS3P49746 956 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 SCN1BQ07699 218 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 DIAPH2-AS1Q14236 149 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 GALEQ14376 348 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 RBM39Q14498 530 aaKnown RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 IL13RA2Q14627 380 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 ZNF691Q5VV52 312 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 ASCL4Q6XD76 172 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 OR2W3Q7Z3T1 314 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 DRAM1Q8N682 238 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 CNIH3Q8TBE1 160 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 PLPPR1Q8TBJ4 325 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 RGP1Q92546 391 aaPredicted RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 RPEQ96AT9 228 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 B9D2Q9BPU9 175 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 NEK6Q9HC98 313 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 AMMECR1Q9Y4X0 333 aaPredicted RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 DYNC2H1Q8NCM8 4307 aaKnown RBP8.14□□□□□ -1.11
VPS50-201ENST00000251739 SORL1Q92673 2214 aa8.14□□□□□ -1.11
VPS50-201ENST00000251739 MEIKINA0A087WXM9 373 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 TMEM212A6NML5 194 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 E9PI62 339 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 H0YJX3 145 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 J3QLW9 94 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 GABRPO00591 440 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 CLIC3O95833 236 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 IGHG2P01859 326 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 OCM2P0CE71 109 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 OCMP0CE72 109 aaPredicted RBP8.13□□□□□ -1.11
VPS50-201ENST00000251739 TMEM225BP0DP42 221 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 ZNF19P17023 458 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 NFYBP25208 207 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 KCNJ3P48549 501 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 MADCAM1Q13477 382 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 EBI3Q14213 229 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 PAN3Q58A45 887 aaKnown RBP8.13□□□□□ -1.11
VPS50-201ENST00000251739 NHLRC3Q5JS37 347 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 C9orf152Q5JTZ5 239 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 SLC16A12Q6ZSM3 486 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 ZNF329Q86UD4 541 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 SERPINA12Q8IW75 414 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 OR8H3Q8N146 312 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 Q8N6K4 173 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 OR10A7Q8NGE5 316 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 OR51A2Q8NGJ7 313 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 OR5D14Q8NGL3 314 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 CHPT1Q8WUD6 406 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 LEAP2Q969E1 77 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 NOL4LQ96MY1 436 aaPredicted RBP8.13□□□□□ -1.11
VPS50-201ENST00000251739 PDCD1LG2Q9BQ51 273 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 ALG8Q9BVK2 526 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 GPR61Q9BZJ8 451 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 IFT22Q9H7X7 185 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 ISG20L2Q9H9L3 353 aaKnown RBP8.13□□□□□ -1.11
VPS50-201ENST00000251739 ING3Q9NXR8 418 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 IDI2-AS1Q9NZ38 188 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 ZNF581Q9P0T4 197 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 AASSQ9UDR5 926 aa8.13□□□□□ -1.11
VPS50-201ENST00000251739 H3BNX3 289 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 HSPB6O14558 160 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 HCKP08631 526 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 RPSAP08865 295 aaKnown RBP8.12□□□□□ -1.11
VPS50-201ENST00000251739 TMEM11P17152 192 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 SSTR5P35346 364 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 RASSF2P50749 326 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 RAB7AP51149 207 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 ALDH3A2P51648 485 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 ZNF816Q0VGE8 651 aaPredicted RBP8.12□□□□□ -1.11
VPS50-201ENST00000251739 MRPL28Q13084 256 aaKnown RBP8.12□□□□□ -1.11
VPS50-201ENST00000251739 ZSCAN26Q16670 478 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 PIGYQ3MUY2 71 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 LPCAT4Q643R3 524 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 LHFPL3Q86UP9 236 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 IZUMO1Q8IYV9 350 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 ZNF565Q8N9K5 539 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 OR51D1Q8NGF3 324 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 RHOXF1Q8NHV9 184 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 HAVCR2Q8TDQ0 301 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 PYDC1Q8WXC3 89 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 ZFP57Q9NU63 452 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 ERVK13-1Q9NX77 482 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 IL36GQ9NZH8 169 aa8.12□□□□□ -1.11
VPS50-201ENST00000251739 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms