RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 OR52I1Q8NGK6 324 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 TNFAIP8L1Q8WVP5 186 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 TFAP2CQ92754 450 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 MRPS18AQ9NVS2 196 aaKnown RBP16.77■□□□□ 0.28
NEDD8-201ENST00000250495 CALYQ9NYX4 217 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 IDI2-AS1Q9NZ38 188 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 TRAV24A0A0B4J272 114 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A18PA6NE21 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A16PA6NEW6 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A20PA6NIJ5 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A9PA6NNJ1 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A12PA8MX19 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A5PA8MXJ8 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A15PP0C7V4 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A13PP0C7W8 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A14PP0C7W9 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 FAM90A24PP0C7X0 464 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 RSU1Q15404 277 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 ZNF529Q6P280 563 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 Q8NFD4 153 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 OR13A1Q8NGR1 328 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 TOMM40LQ969M1 308 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 LINC00574Q9H8X3 128 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 SMPD3Q9NY59 655 aaPredicted RBP16.76■□□□□ 0.27
NEDD8-201ENST00000250495 MOB4Q9Y3A3 225 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 HSPE1-MOB4S4R3N1 261 aa16.76■□□□□ 0.27
NEDD8-201ENST00000250495 SH2D7A6NKC9 451 aaPredicted RBP16.75■□□□□ 0.27
NEDD8-201ENST00000250495 GABRPO00591 440 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 CLIC3O95833 236 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 IL1AP01583 271 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 CD2P06729 351 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 SLC35A2P78381 396 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 PAX5Q02548 391 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 UTF1Q5T230 341 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 ASCL4Q6XD76 172 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 SLC16A12Q6ZSM3 486 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 OR10A7Q8NGE5 316 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 CNBD2Q96M20 576 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 JAM3Q9BX67 310 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 ZNF281Q9Y2X9 895 aa16.75■□□□□ 0.27
NEDD8-201ENST00000250495 NPIPB11E5RHQ5 1161 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 HTR3BO95264 441 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 DUS4LO95620 317 aaKnown RBP16.74■□□□□ 0.27
NEDD8-201ENST00000250495 MYF6P23409 242 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 SOX2P48431 317 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 MADCAM1Q13477 382 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 CCDC58Q4VC31 144 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 KHDC1LQ5JSQ8 128 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 RPL22L1Q6P5R6 122 aaKnown RBP16.74■□□□□ 0.27
NEDD8-201ENST00000250495 OSR2Q8N2R0 312 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 OR51A2Q8NGJ7 313 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 GPR148Q8TDV2 347 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 RCC1LQ96I51 464 aaKnown RBP16.74■□□□□ 0.27
NEDD8-201ENST00000250495 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 FAM118AQ9NWS6 357 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 PSG11Q9UQ72 335 aa16.74■□□□□ 0.27
NEDD8-201ENST00000250495 IGHV3-7P01780 117 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 SNRNP70P08621 437 aaKnown RBP16.73■□□□□ 0.27
NEDD8-201ENST00000250495 CAPGP40121 348 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 RAB7AP51149 207 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 HES1Q14469 280 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 RSBN1Q5VWQ0 802 aaPredicted RBP16.73■□□□□ 0.27
NEDD8-201ENST00000250495 C10orf99Q6UWK7 81 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 OR8H3Q8N146 312 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 DRAM1Q8N682 238 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 OR10K1Q8NGX5 313 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 OR56B4Q8NH76 319 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 RFESDQ8TAC1 157 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 MRGPRDQ8TDS7 321 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 FGF20Q9NP95 211 aaPredicted RBP16.73■□□□□ 0.27
NEDD8-201ENST00000250495 TAS2R4Q9NYW5 299 aa16.73■□□□□ 0.27
NEDD8-201ENST00000250495 PSMB11A5LHX3 300 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 LIMS3P0CW19 117 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 LIMS4P0CW20 117 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 GZMHP20718 246 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 LTC4SQ16873 150 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 PIGYQ3MUY2 71 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 DHRSXQ8N5I4 330 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 PLPPR1Q8TBJ4 325 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 LEAP2Q969E1 77 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 S100A13Q99584 98 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 DPCDQ9BVM2 203 aaPredicted RBP16.72■□□□□ 0.27
NEDD8-201ENST00000250495 METTL9Q9H1A3 318 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 ING4Q9UNL4 249 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 ST3GAL6Q9Y274 331 aa16.72■□□□□ 0.27
NEDD8-201ENST00000250495 DPPA5A6NC42 116 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 MPIG6BO95866 241 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 CSTBP04080 98 aaKnown RBP16.71■□□□□ 0.27
NEDD8-201ENST00000250495 TMEM11P17152 192 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 DCKP27707 260 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 PPP3R1P63098 170 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 TMPRSS11AQ6ZMR5 421 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 SUMF2Q8NBJ7 301 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 ZNF555Q8NEP9 628 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 OR10X1Q8NGY0 326 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 CHPT1Q8WUD6 406 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 APH1BQ8WW43 257 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 RGP1Q92546 391 aaPredicted RBP16.71■□□□□ 0.27
NEDD8-201ENST00000250495 TMEM106AQ96A25 262 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 MRPS26Q9BYN8 205 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms