RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CLN3Q13286 438 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 KIR2DS1Q14954 304 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 MYPOPQ86VE0 399 aaPredicted RBP10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 ZNF391Q9UJN7 358 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 TRAPPC2LQ9UL33 140 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 ZFP92A6NM28 416 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 CD300LBA8K4G0 201 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 DNPH1O43598 174 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 UBE2KP61086 200 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 SCGB1C1Q8TD33 95 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 LIPGQ9Y5X9 500 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 POMT1Q9Y6A1 747 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 RPL36A-HNRNPH2H7BZ11 118 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 TUSC2O75896 110 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 DANCRP0C864 163 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 SSPNQ14714 243 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 SHEQ5VZ18 495 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 APOBEC3DQ96AK3 386 aaPredicted RBP10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 SLC35B3Q9H1N7 401 aa10.84□□□□□ -0.67
RAB3IP-201ENST00000247833 IGSF23A1L1A6 192 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 TRDCB7Z8K6 153 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 GRPP07492 148 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 FBP1P09467 338 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 HMGN3Q15651 99 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 LCN15Q6UWW0 184 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 LILRB2Q8N423 598 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 OR2M7Q8NG81 312 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.67
RAB3IP-201ENST00000247833 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 DEGS1O15121 323 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 OR2C1O95371 312 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 TAGLN2P37802 199 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 IDH3GP51553 393 aaPredicted RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 ZFP36L1Q07352 338 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 BEND4Q6ZU67 534 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 UBALD2Q8IYN6 164 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 TMEM252Q8N6L7 170 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 RNF150Q9ULK6 438 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 STRAPQ9Y3F4 350 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 DOCK11Q5JSL3 2073 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 CADP27708 2225 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 CD5P06127 495 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 SULT1A1P50225 295 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 RPL23AP62750 156 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 FABP9Q0Z7S8 132 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 ZNF674Q2M3X9 581 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 RIPPLY2Q5TAB7 128 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 CXorf67Q86X51 503 aaPredicted RBP10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 FAM173AQ9BQD7 235 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 MTCH1Q9NZJ7 389 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 GNG13Q9P2W3 67 aa10.83□□□□□ -0.68
RAB3IP-201ENST00000247833 NTN3O00634 580 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 CYTIPO60759 359 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 EIF3IQ13347 325 aaKnown RBP10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 GCNT2Q8N0V5 402 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 HIST1H2BAQ96A08 127 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 ATXN7O15265 892 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 HOXA1P49639 335 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 MEOX2P50222 304 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 ELLP55199 621 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 OR8B8Q15620 311 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 OR1J1Q8NGS3 322 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 SLC22A20A6NK97 555 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 ZNF727A8MUV8 499 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 CYC1P08574 325 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 CCL20P78556 96 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 OR8G2PQ6IF36 304 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 NTNG2Q96CW9 530 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 C18orf12Q96KH6 178 aa10.82□□□□□ -0.68
RAB3IP-201ENST00000247833 NXPH2O95156 264 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 METTL15P1P0C7V9 234 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 PSG2P11465 335 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 SELEP16581 610 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 RAB11AP62491 216 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 LTC4SQ16873 150 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 ABLIM2Q6H8Q1 611 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 RBMS3Q6XE24 437 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 C1orf210Q8IVY1 113 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 DMBX1Q8NFW5 382 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 PRSS50Q9UI38 385 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 ZDHHC8Q9ULC8 765 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 CDS2O95674 445 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 VDAC1P21796 283 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 RAB5CP51148 216 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 FGF12P61328 243 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 ZNF528Q3MIS6 628 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 SPANXN5Q5MJ07 72 aa10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 SELENOHQ8IZQ5 122 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-201ENST00000247833 FAM58AQ8N1B3 248 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms