RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 ADIPOQQ15848 244 aa11.29□□□□□ -0.6
NUP85-201ENST00000245544 PHLDA2Q53GA4 152 aa11.29□□□□□ -0.6
NUP85-201ENST00000245544 ASCC1Q8N9N2 400 aaKnown RBP11.29□□□□□ -0.6
NUP85-201ENST00000245544 RIMS4Q9H426 269 aaPredicted RBP11.29□□□□□ -0.6
NUP85-201ENST00000245544 IGSF10Q6WRI0 2623 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 IGKV1D-13A0A0B4J2D9 117 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 RGS13O14921 159 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 TSC22D2O75157 780 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 IGHV1-46P01743 117 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 IGKV1-13P0DP09 117 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 CXCL2P19875 107 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 LMO1P25800 156 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 ECI1P42126 302 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 ZNF81P51508 661 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 LDLRAD3Q86YD5 345 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 GAPTQ8N292 157 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 ZCCHC24Q8N2G6 241 aaKnown RBP11.28□□□□□ -0.6
NUP85-201ENST00000245544 PRR18Q8N4B5 295 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 GCSAMQ8N6F7 178 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 KIRREL1Q96J84 757 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
NUP85-201ENST00000245544 TREM2Q9NZC2 230 aa11.28□□□□□ -0.6
NUP85-201ENST00000245544 ABCA4P78363 2273 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 IGHV3OR15-7A0A075B7D8 119 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 KIR2DS1A0A191URI9 304 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 C13orf42A0A1B0GVH6 325 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 OR4A8P0C604 315 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 SERPINF1P36955 418 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 KIR2DS4P43632 304 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 ASCL1P50553 236 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 HLA-DRB3P79483 266 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 AESQ08117 197 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 KIR2DS1Q14954 304 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 SP6Q3SY56 376 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 FAM201AQ5SY85 155 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 CD177Q8N6Q3 437 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 LINC01560Q8TB33 94 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 NEUROG1Q92886 237 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 GPHA2Q96T91 129 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 DHRS9Q9BPW9 319 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 PDCD10Q9BUL8 212 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 RASL12Q9NYN1 266 aa11.27□□□□□ -0.6
NUP85-201ENST00000245544 MEX3AA1L020 520 aaKnown RBP11.27□□□□□ -0.61
NUP85-201ENST00000245544 SRRM5B3KS81 715 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 IFNA2P01563 188 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 TK1P04183 234 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 GNRHRP30968 328 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 MDH2P40926 338 aaKnown RBP11.27□□□□□ -0.61
NUP85-201ENST00000245544 HERV-K104P61576 105 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 COL10A1Q03692 680 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.61
NUP85-201ENST00000245544 MZT1Q08AG7 82 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 SHEQ5VZ18 495 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 FIP1L1Q6UN15 594 aaKnown RBP11.27□□□□□ -0.61
NUP85-201ENST00000245544 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 TPRX1Q8N7U7 411 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 SLC2A9Q9NRM0 540 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 OR1A1Q9P1Q5 309 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 TRAPPC2LQ9UL33 140 aa11.27□□□□□ -0.61
NUP85-201ENST00000245544 FXYD6-FXYD2A0A087WZ82 144 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 TEX13DA0A0J9YY54 714 aaPredicted RBP11.26□□□□□ -0.61
NUP85-201ENST00000245544 ARPC5O15511 151 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 TUSC2O75896 110 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 CD8AP01732 235 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 PSG2P11465 335 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 SELENOVP59797 346 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 SMIM21Q3B7S5 101 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 LPCAT3Q6P1A2 487 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 SGPP2Q8IWX5 399 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 DMRTC2Q8IXT2 367 aaPredicted RBP11.26□□□□□ -0.61
NUP85-201ENST00000245544 SECTM1Q8WVN6 248 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 RTN4IP1Q8WWV3 396 aaPredicted RBP11.26□□□□□ -0.61
NUP85-201ENST00000245544 COQ2Q96H96 371 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 RSRP1Q9BUV0 290 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 SLA2Q9H6Q3 261 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 HEXA-AS1Q9H8Q6 139 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 DSCAMO60469 2012 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 IGKV1D-17A0A075B6S4 117 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 TRBV6-7A0A0A0MS04 114 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 C5orf51A6NDU8 294 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 HOXB5P09067 269 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 CHRNB4P30926 498 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 OR3A1P47881 315 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 KCNJ3P48549 501 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 UCP3P55916 312 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 TNFAIP6P98066 277 aaPredicted RBP11.26□□□□□ -0.61
NUP85-201ENST00000245544 ABCA11PQ4W5N1 156 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 ZNF818PQ6ZRF7 136 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 SLC38A6Q8IZM9 456 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 OR4A4PQ8NGN8 299 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 COQ8AQ8NI60 647 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 PPP1R1CQ8WVI7 109 aa11.26□□□□□ -0.61
NUP85-201ENST00000245544 OR10C1Q96KK4 312 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms