RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SLC6A7Q99884 636 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 BANF2Q9H503 90 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 TXNL4BQ9NX01 149 aaKnown RBP9.24□□□□□ -0.93
SF3B6-201ENST00000233468 PEX16Q9Y5Y5 336 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 WNK2Q9Y3S1 2297 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 LOC100506127A0A0U1RQW1 187 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 A0A1W2PP11 408 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 ZNF729A6NN14 1252 aaPredicted RBP9.23□□□□□ -0.93
SF3B6-201ENST00000233468 IFITM5A6NNB3 132 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 NOTOA8MTQ0 251 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 AIPO00170 330 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 NPFFO15130 113 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 TMEM127O75204 238 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 PDCD6O75340 191 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 CLPXO76031 633 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 VENTXO95231 258 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 PAHP00439 452 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 FBP1P09467 338 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 IGHV1-8P0DP01 117 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 CCL3L1P16619 93 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 JUNBP17275 347 aaPredicted RBP9.23□□□□□ -0.93
SF3B6-201ENST00000233468 CFPP27918 469 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 GLIPR1P48060 266 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 HILS1P60008 231 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 RPS27AP62979 156 aaKnown RBP9.23□□□□□ -0.93
SF3B6-201ENST00000233468 BAMBIQ13145 260 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 RAB12Q6IQ22 244 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 BRD3OSQ6XYD6 125 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 TPRX1Q8N7U7 411 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 TMEM104Q8NE00 496 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 EDARADDQ8WWZ3 215 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 C22orf15Q8WYQ4 148 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 TNFRSF14Q92956 283 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 CHCHD6Q9BRQ6 235 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 ING3Q9NXR8 418 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 ETAA1Q9NY74 926 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 RCC2Q9P258 522 aaKnown RBP9.23□□□□□ -0.93
SF3B6-201ENST00000233468 FBLN5Q9UBX5 448 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 RAB22AQ9UL26 194 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 SESN1Q9Y6P5 492 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
SF3B6-201ENST00000233468 KBTBD11-OT1A0A1B0GTJ5 212 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 MEIOCA2RUB1 952 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 TRIM64CA6NLI5 447 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 TMEM14DPA8MWL7 114 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 RNASEK-C17orf49H0YIS7 233 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 AIREO43918 545 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 GLP1RP43220 463 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 DLX6P56179 175 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 P2RY14Q15391 338 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 C2orf76Q3KRA6 126 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 C6orf183Q5T699 404 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 RSBN1Q5VWQ0 802 aaPredicted RBP9.22□□□□□ -0.93
SF3B6-201ENST00000233468 TRAT1Q6PIZ9 186 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 HEPN1Q6WQI6 88 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 RTN4RL2Q86UN3 420 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 CROCCP3Q8IVE0 287 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 PDZD9Q8IXQ8 264 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 SIGLECL1Q8N7X8 197 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 OR10A7Q8NGE5 316 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 OR51D1Q8NGF3 324 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 OR56B1Q8NGI3 324 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 SLC25A28Q96A46 364 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 CREB3L1Q96BA8 519 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 COQ2Q96H96 371 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 TM2D1Q9BX74 207 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 MRPS26Q9BYN8 205 aaKnown RBP9.22□□□□□ -0.93
SF3B6-201ENST00000233468 OR51E2Q9H255 320 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 DPAGT1Q9H3H5 408 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 KIF25Q9UIL4 384 aa9.22□□□□□ -0.93
SF3B6-201ENST00000233468 METTL21EPA6NDL7 271 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 BTBD17A6NE02 478 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 COX7A1P24310 79 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 GADD45AP24522 165 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 CDK2P24941 298 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 QRFPP83859 136 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 ARL6IP1Q15041 203 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 TMEM30BQ3MIR4 351 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 NKAPLQ5M9Q1 402 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 HES5Q5TA89 166 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 RUSC1-AS1Q66K80 236 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF782Q6ZMW2 699 aaPredicted RBP9.21□□□□□ -0.94
SF3B6-201ENST00000233468 SLC16A12Q6ZSM3 486 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 PNKDQ8N490 385 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 C11orf42Q8N5U0 333 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 TMEM86BQ8N661 226 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF596Q8TC21 504 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 PTX4Q96A99 478 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 GFI1Q99684 422 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 TMEM133Q9H2Q1 129 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 RIMS4Q9H426 269 aaPredicted RBP9.21□□□□□ -0.94
SF3B6-201ENST00000233468 PRDM13Q9H4Q3 707 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 PLEKHJ1Q9NW61 149 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 KCNIP1Q9NZI2 227 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 TRAPPC2LQ9UL33 140 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 TBL2Q9Y4P3 447 aaKnown RBP9.21□□□□□ -0.94
SF3B6-201ENST00000233468 POMT1Q9Y6A1 747 aa9.21□□□□□ -0.94
SF3B6-201ENST00000233468 CLDN34H7C241 214 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms