RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OR2B8PP59922 312 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 BAXQ07812 192 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 KIAA0141Q14154 515 aaPredicted RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 OR14L1PQ8NHC6 308 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SPTSSAQ969W0 71 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 RBMXL1Q96E39 390 aaKnown RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 FBXO17Q96EF6 278 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 GNPNAT1Q96EK6 184 aaPredicted RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 SLC25A31Q9H0C2 315 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 RYDENQ9NUL5 291 aaKnown RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 ZFYVE26Q68DK2 2539 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 TRAV17A0A0B4J275 112 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 IFITM10A6NMD0 228 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 SP1P08047 785 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 CRYGSP22914 178 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 ZNF766Q5HY98 468 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 OR2B11Q5JQS5 317 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 PRAMEF20Q5VT98 475 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 TMEM211Q6ICI0 200 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 MYO7BQ6PIF6 2116 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 LHFPL2Q6ZUX7 228 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 OR52M1Q8NGK5 317 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 HDHD3Q9BSH5 251 aaPredicted RBP17.67■□□□□ 0.42
SNX3-201ENST00000230085 C20orf24Q9BUV8 137 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 ZNF286AQ9HBT8 521 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 TMEM242Q9NWH2 141 aa17.67■□□□□ 0.42
SNX3-201ENST00000230085 ZNF850A8MQ14 1090 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 SHISA8B8ZZ34 492 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 G3V3Y1 287 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 M0R135 149 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 TP53I11O14683 189 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 HSPA12AO43301 675 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 CD46P15529 392 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 GABRR1P24046 479 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 NHLH2Q02577 135 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 KRTAP27-1Q3LI81 207 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 FAM213BQ8TBF2 198 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 ZNF799Q96GE5 643 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 PARP12Q9H0J9 701 aaKnown RBP17.66■□□□□ 0.42
SNX3-201ENST00000230085 PLEKHF2Q9H8W4 249 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 DEPPQ9NTK1 212 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 LYRM2Q9NU23 88 aaPredicted RBP17.66■□□□□ 0.42
SNX3-201ENST00000230085 GAR1Q9NY12 217 aaKnown RBP17.66■□□□□ 0.42
SNX3-201ENST00000230085 H3BQ15 152 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 ATXN7O15265 892 aaPredicted RBP17.66■□□□□ 0.42
SNX3-201ENST00000230085 C1QL1O75973 258 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 DIRAS3O95661 229 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 ELOBQ15370 118 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 OR8G1Q15617 311 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 TMEM123Q8N131 208 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 ZNF610Q8N9Z0 462 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 RELTQ969Z4 430 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 BBC3Q96PG8 261 aaPredicted RBP17.66■□□□□ 0.42
SNX3-201ENST00000230085 TECTBQ96PL2 329 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 FAAP24Q9BTP7 215 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 PROK2Q9HC23 129 aa17.66■□□□□ 0.42
SNX3-201ENST00000230085 KALRNO60229 2985 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 FAM230AA0A1W2PPH8 454 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 TRDCB7Z8K6 153 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 XRCC2O43543 280 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 HBE1P02100 147 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 P04436 131 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 ATP6V0CP27449 155 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 MTCP1P56278 107 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 SSTP61278 116 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 MRPS34P82930 218 aaKnown RBP17.65■□□□□ 0.42
SNX3-201ENST00000230085 RSU1Q15404 277 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 ACSF3Q4G176 576 aaPredicted RBP17.65■□□□□ 0.42
SNX3-201ENST00000230085 KHDC3LQ587J8 217 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 PYY3Q5JQD4 70 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 FAM27BQ5VT28 67 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 CARD17Q5XLA6 110 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 TMEM182Q6ZP80 229 aaPredicted RBP17.65■□□□□ 0.42
SNX3-201ENST00000230085 HSD17B11Q8NBQ5 300 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 Q8NFD4 153 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 PIGTQ969N2 578 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 SGK3Q96BR1 496 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 RAB39BQ96DA2 213 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 TMEM222Q9H0R3 208 aa17.65■□□□□ 0.42
SNX3-201ENST00000230085 FOXD3Q9UJU5 478 aaPredicted RBP17.65■□□□□ 0.42
SNX3-201ENST00000230085 PRRC2CQ9Y520 2896 aaKnown RBP17.65■□□□□ 0.42
SNX3-201ENST00000230085 SPTA1P02549 2419 aa17.64■□□□□ 0.42
SNX3-201ENST00000230085 PIGBOS1A0A0B4J2F0 54 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 A0A0G2JMM0 328 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 A0A1W2PNR3 127 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 A0A1W2PPB8 328 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 A0A1W2PRS3 328 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A10PA6NDY2 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A18PA6NE21 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A16PA6NEW6 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A20PA6NIJ5 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A8PA6NJQ4 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A7PA6NKC0 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A22PA8MWA6 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 KIR3DP1A8MWS1 328 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A12PA8MX19 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A5PA8MXJ8 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A23PA8MXZ1 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 RAMP1O60894 148 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A15PP0C7V4 464 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms