RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ETAA1Q9NY74 926 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 HSF4Q9ULV5 492 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 TRAV18A0A075B6X5 111 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 MEX3AA1L020 520 aaKnown RBP13.54□□□□□ -0.24
LIM2-201ENST00000221973 A8MXK9 166 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 B4DSR2 109 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 C22orf46C9J442 243 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 GPR37O15354 613 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 CSN2P05814 226 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 MSMBP08118 114 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 HIST1H1DP16402 221 aaKnown RBP13.54□□□□□ -0.24
LIM2-201ENST00000221973 GLIPR1P48060 266 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 P2RX3P56373 397 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 CDNFQ49AH0 187 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 CD276Q5ZPR3 534 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 FAM185AQ8N0U4 392 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 LINC01356Q8N9X3 169 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 DCTN5Q9BTE1 182 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 C19orf12Q9NSK7 152 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 AK3Q9UIJ7 227 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 ADAM30Q9UKF2 790 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 KCNK7Q9Y2U2 307 aa13.54□□□□□ -0.24
LIM2-201ENST00000221973 A0A0A6YYH2 397 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 FUOMA2VDF0 154 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 A6NJ64 397 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 MFNGO00587 321 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 XRCC3O43542 346 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 ECDO95905 644 aaPredicted RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 ERP29P30040 261 aaKnown RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 RPL31P62899 125 aaKnown RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 RSBN1Q5VWQ0 802 aaPredicted RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 NUDT16L1Q9BRJ7 211 aaKnown RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 EXTL2Q9UBQ6 330 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 KIF25Q9UIL4 384 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 RPUSD1Q9UJJ7 312 aaKnown RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 ELF5Q9UKW6 265 aaPredicted RBP13.53□□□□□ -0.24
LIM2-201ENST00000221973 A3GALT2U3KPV4 340 aa13.53□□□□□ -0.24
LIM2-201ENST00000221973 TENM1Q9UKZ4 2725 aa13.52□□□□□ -0.24
LIM2-201ENST00000221973 MEIKINA0A087WXM9 373 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 TRAV39A0A0B4J263 110 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 A0A1W2PQ09 198 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 TMEM30CPA0ZSE6 113 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 ODAMA1E959 279 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 TAS2R20P59543 309 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 ARFRP1Q13795 201 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 ZNF260Q3ZCT1 412 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 SLC35E4Q6ICL7 350 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 CNIH2Q6PI25 160 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 ZNF497Q6ZNH5 498 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 OR4K15Q8NH41 348 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 CCDC107Q8WV48 283 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 HDHD3Q9BSH5 251 aaPredicted RBP13.52□□□□□ -0.25
LIM2-201ENST00000221973 MMP26Q9NRE1 261 aa13.52□□□□□ -0.25
LIM2-201ENST00000221973 MRPS7Q9Y2R9 242 aaKnown RBP13.52□□□□□ -0.25
LIM2-201ENST00000221973 PPIAL4CA0A0B4J2A2 164 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 TMEM235A6NFC5 223 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 SERPINE3A8MV23 424 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
LIM2-201ENST00000221973 CLPXO76031 633 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 MT-ND4P03905 459 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 GSTP1P09211 210 aaKnown RBP13.51□□□□□ -0.25
LIM2-201ENST00000221973 PPIAL4GP0DN37 164 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 PTHLHP12272 177 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 TNFSF8P32971 234 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 S100A5P33763 92 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 TALDO1P37837 337 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 MNDAP41218 407 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 TMEM200BQ69YZ2 307 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 TRAPPC6BQ86SZ2 158 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 LY6G5BQ8NDX9 201 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 C8orf46Q8TAG6 207 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 DIRAS2Q96HU8 199 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 CMSS1Q9BQ75 279 aaKnown RBP13.51□□□□□ -0.25
LIM2-201ENST00000221973 CHMP1AQ9HD42 196 aaPredicted RBP13.51□□□□□ -0.25
LIM2-201ENST00000221973 TRAPPC2LQ9UL33 140 aa13.51□□□□□ -0.25
LIM2-201ENST00000221973 POLR3KQ9Y2Y1 108 aaPredicted RBP13.51□□□□□ -0.25
LIM2-201ENST00000221973 hADV38S2A0JD32 116 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 CA11O75493 328 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 CD3GP09693 182 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 HNF1AP20823 631 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 GLP1RP43220 463 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 GNG2P59768 71 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 MRPS15P82914 257 aaKnown RBP13.5□□□□□ -0.25
LIM2-201ENST00000221973 PAX5Q02548 391 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 PAX2Q02962 417 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 MEF2CQ06413 473 aaPredicted RBP13.5□□□□□ -0.25
LIM2-201ENST00000221973 ZNF273Q14593 569 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 C11orf91Q3C1V1 193 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 TCF23Q7RTU1 214 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 MRPL30Q8TCC3 161 aaKnown RBP13.5□□□□□ -0.25
LIM2-201ENST00000221973 TMEM186Q96B77 213 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 AUNIPQ9H7T9 357 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIM2-201ENST00000221973 HIF1ANQ9NWT6 349 aa13.5□□□□□ -0.25
LIM2-201ENST00000221973 PTTG2Q9NZH5 202 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms