RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 OR2C3Q8N628 320 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 SUMF2Q8NBJ7 301 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 APOBEC3DQ96AK3 386 aaPredicted RBP12.51□□□□□ -0.41
CNOT3-201ENST00000221232 TMEM222Q9H0R3 208 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 CACFD1Q9UGQ2 172 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 NDUFS6O75380 124 aaKnown RBP12.51□□□□□ -0.41
CNOT3-201ENST00000221232 ZNF44P15621 663 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 CCL20P78556 96 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 LUZP4Q9P127 313 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
CNOT3-201ENST00000221232 WNT5AP41221 380 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 MEOX1P50221 254 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 VAMP2P63027 116 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 RUNX1Q01196 453 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 ZNF600Q6ZNG1 722 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 ZNF16P17020 682 aaPredicted RBP12.5□□□□□ -0.41
CNOT3-201ENST00000221232 RAB13P51153 203 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 UCP3P55916 312 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 IL13RA2Q14627 380 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 POM121L2Q96KW2 1035 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
CNOT3-201ENST00000221232 ERRFI1Q9UJM3 462 aaPredicted RBP12.5□□□□□ -0.41
CNOT3-201ENST00000221232 IGKV3D-15A0A087WSY6 115 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 FAM157AC9JC47 383 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 TMEM50AO95807 157 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 ARG1P05089 322 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 CBR1P16152 277 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 HNF4GQ14541 408 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 GPR157Q5UAW9 335 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 LINC00518Q8N0U6 118 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 OR5C1Q8NGR4 320 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 TMEM171Q8WVE6 324 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
CNOT3-201ENST00000221232 PRR14LQ5THK1 2151 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 KIAA2026Q5HYC2 2103 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 ANKRD30BLA7E2S9 258 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 PROB1E7EW31 1015 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 ATXN7O15265 892 aaPredicted RBP12.49□□□□□ -0.41
CNOT3-201ENST00000221232 CHST1O43916 411 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 SLC34A2O95436 690 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 CELA3BP08861 270 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 SEC11BP0C7V7 166 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 APLNRP35414 380 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 AWAT1Q58HT5 328 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 GINS3Q9BRX5 216 aa12.49□□□□□ -0.41
CNOT3-201ENST00000221232 MRPS18CQ9Y3D5 142 aaKnown RBP12.49□□□□□ -0.41
CNOT3-201ENST00000221232 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
CNOT3-201ENST00000221232 SIRPB1O00241 398 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 H2AFB1P0C5Y9 115 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 DYNLT3P51808 116 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 ERVS71-1P61550 626 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 ZNF154Q13106 437 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 ZNF528Q3MIS6 628 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 AVPI1Q5T686 147 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
CNOT3-201ENST00000221232 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 GLRX2Q9NS18 164 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 ABI3Q9P2A4 366 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 PPP1R3CQ9UQK1 317 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 BOD1L1Q8NFC6 3051 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 DIDO1Q9BTC0 2240 aaKnown RBP12.48□□□□□ -0.41
CNOT3-201ENST00000221232 A0A0G2JRQ6 117 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 COLCA2A8K830 154 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 WRBO00258 174 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 TNFSF15O95150 251 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 NAPSAO96009 420 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 FBP1P09467 338 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 PMP22Q01453 160 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 PUS1Q9Y606 427 aaKnown RBP eCLIP12.48□□□□□ -0.41
CNOT3-201ENST00000221232 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 C7orf77A4D0Y5 90 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 EIF3GO75821 320 aaKnown RBP eCLIP12.48□□□□□ -0.41
CNOT3-201ENST00000221232 CLN3Q13286 438 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 HAGHQ16775 308 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 MDP1Q86V88 176 aa12.48□□□□□ -0.41
CNOT3-201ENST00000221232 UMAD1C9J7I0 102 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 PGLYRP1O75594 196 aaPredicted RBP12.47□□□□□ -0.41
CNOT3-201ENST00000221232 WISP2O76076 250 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 CNOT4O95628 575 aaKnown RBP12.47□□□□□ -0.41
CNOT3-201ENST00000221232 MT-CO3P00414 261 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 ALKBH6Q3KRA9 238 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 OR5P3Q8WZ94 311 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms