RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SLC25A42Q86VD7 318 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 TGIF2Q9GZN2 237 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 ALX3O95076 343 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 MMP16P51512 607 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 PRSS3P2Q8NHM4 247 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 UFC1Q9Y3C8 167 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 MPC2O95563 127 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 HLA-GP17693 338 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 SLC35B1P78383 322 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 NPAS1Q99742 590 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 TRAPPC1Q9Y5R8 145 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 PRR19A6NJB7 356 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 OR4C45A6NMZ5 311 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 FFAR1O14842 300 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 KCNK15Q9H427 330 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 OR2W1Q9Y3N9 320 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 ORM1P02763 201 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 INHBBP09529 407 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 ID1P41134 155 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 OR4A4PQ8NGN8 299 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF519Q8TB69 540 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 TEX30Q5JUR7 227 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 WFDC3Q8IUB2 231 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF714Q96N38 554 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 ANKRD20A5PA0PJZ0 165 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 MVDP53602 400 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 COL10A1Q03692 680 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 ZBTB44Q8NCP5 570 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 RPS4Y2Q8TD47 263 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 ZP4Q12836 540 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 PIGYQ3MUY2 71 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 NEURL1O76050 574 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF273Q14593 569 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 TUSC1Q2TAM9 212 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 KLHDC1Q8N7A1 406 aa16.55■□□□□ 0.24
SMPD3-201ENST00000219334 XAF1Q6GPH4 301 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 C5orf17Q8NAS9 161 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 LINC00052Q96N35 136 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 CCL13Q99616 98 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 TRAV39A0A0B4J263 110 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 SPINK4O60575 86 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 CLDN14O95500 239 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 SFTA3P0C7M3 94 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 ACAA2P42765 397 aaKnown RBP16.54■□□□□ 0.24
SMPD3-201ENST00000219334 KLRB1Q12918 225 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 ST3GAL2Q16842 350 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 PERPQ96FX8 193 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 PIMREGQ9BSJ6 248 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 CCL27Q9Y4X3 112 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 RPL36A-HNRNPH2H7BZ11 118 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 ICMTO60725 284 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 C1QAP02745 245 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 NIT2Q9NQR4 276 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 HS3ST3B1Q9Y662 390 aa16.54■□□□□ 0.24
SMPD3-201ENST00000219334 MGST3O14880 152 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 REG1BP48304 166 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 LOXL3P58215 753 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 J3KRW8 73 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 K7N7A8 449 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 IFNL4K9M1U5 179 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 PMCHP20382 165 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 ANKRD55Q3KP44 614 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 OR2V2Q96R30 315 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 P2RX4Q99571 388 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 SEC16AO15027 2179 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 FCARP24071 287 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 CSRP2Q16527 193 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 RNASEKQ6P5S7 137 aaKnown RBP16.53■□□□□ 0.24
SMPD3-201ENST00000219334 FBXL17Q9UF56 701 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 ARAP2Q8WZ64 1704 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 APELAP0DMC3 54 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 DAOP14920 347 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 PSG4Q00888 419 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF561Q8N587 486 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 MARS2Q96GW9 593 aaKnown RBP16.53■□□□□ 0.24
SMPD3-201ENST00000219334 Q9N2K0 584 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 PILRAQ9UKJ1 303 aa16.53■□□□□ 0.24
SMPD3-201ENST00000219334 FAM106CPP0CH98 169 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 ATP5J2P56134 94 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 FAM78BQ5VT40 261 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 RNF115Q9Y4L5 304 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 MCM3APO60318 1980 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 GAPDHP04406 335 aaKnown RBP16.52■□□□□ 0.24
SMPD3-201ENST00000219334 FABP4P15090 132 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 OR4X1Q8NH49 305 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 RBM14Q96PK6 669 aaKnown RBP16.52■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF426Q9BUY5 554 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 CHST1O43916 411 aa16.52■□□□□ 0.24
SMPD3-201ENST00000219334 HIST1H1EP10412 219 aaKnown RBP16.52■□□□□ 0.24
SMPD3-201ENST00000219334 C9orf172C9J069 976 aa16.52■□□□□ 0.23
SMPD3-201ENST00000219334 RAB29O14966 203 aa16.52■□□□□ 0.23
SMPD3-201ENST00000219334 DYNLT3P51808 116 aa16.52■□□□□ 0.23
SMPD3-201ENST00000219334 IGKV1D-16P01601 117 aa16.52■□□□□ 0.23
SMPD3-201ENST00000219334 UQCC3Q6UW78 93 aa16.52■□□□□ 0.23
SMPD3-201ENST00000219334 TSPAN2O60636 221 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 ADAP1O75689 374 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 HOXB1P14653 301 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-201ENST00000219334 FAM181AQ8N9Y4 354 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms