RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 LILRB3O75022 631 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 ASAH2BP0C7U1 165 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 ERGP11308 486 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 CRISP2P16562 243 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 OTX2P32243 289 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
PTPRA-201ENST00000216877 TMEM187Q14656 261 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 MSMO1Q15800 293 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 PRR27Q6MZM9 219 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 FIGLAQ6QHK4 219 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 SLC25A22Q9H936 323 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 ERRFI1Q9UJM3 462 aaPredicted RBP12.75□□□□□ -0.37
PTPRA-201ENST00000216877 VCANP13611 3396 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 GOSR1O95249 250 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 RSPO4Q2I0M5 234 aaPredicted RBP12.75□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF542PQ5EBM4 170 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 GCNT2Q8N0V5 402 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 DGAT2Q96PD7 388 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
PTPRA-201ENST00000216877 TMEM242Q9NWH2 141 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF586Q9NXT0 402 aa12.75□□□□□ -0.37
PTPRA-201ENST00000216877 H0YIG0 161 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 SERF1AO75920 110 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 AMTP48728 403 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 PSMB3P49720 205 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 PPP1CBP62140 327 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 FOXK1P85037 733 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 TLE3Q04726 772 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 IZUMO4Q1ZYL8 232 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 OR4A47Q6IF82 309 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 LRRC75AQ8NAA5 344 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF814B7Z6K7 855 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 TRDCB7Z8K6 153 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 PROB1E7EW31 1015 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 NDUFB8O95169 186 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 GYPAP02724 150 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
PTPRA-201ENST00000216877 ROM1Q03395 351 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 FOXF1Q12946 379 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
PTPRA-201ENST00000216877 SAXO1Q8IYX7 474 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 PHPT1Q9NRX4 125 aaPredicted RBP12.74□□□□□ -0.37
PTPRA-201ENST00000216877 PITX3O75364 302 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 IL3RAP26951 378 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 UBE2G2P60604 165 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 RPS16P62249 146 aaKnown RBP12.74□□□□□ -0.37
PTPRA-201ENST00000216877 KMT5CQ86Y97 462 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 MRPL30Q8TCC3 161 aaKnown RBP12.74□□□□□ -0.37
PTPRA-201ENST00000216877 SPPL3Q8TCT6 385 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 C5orf42Q9H799 3197 aa12.74□□□□□ -0.37
PTPRA-201ENST00000216877 KIAA1324LA8MWY0 1029 aaPredicted RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 HSBP1L1C9JCN9 74 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 F5H5K5 113 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 QRFPP83859 136 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 ARHGEF39Q8N4T4 335 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 C16orf52Q8NHV5 167 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 PARLQ9H300 379 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 PNO1Q9NRX1 252 aaKnown RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 UQCR10Q9UDW1 63 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 ANXA10Q9UJ72 324 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 TNRC18O15417 2968 aaPredicted RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 NCOR1O75376 2440 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 CBLN1P23435 193 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 TAS2R30P59541 319 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 COA6Q5JTJ3 125 aaKnown RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 TMEM240Q5SV17 173 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 CISD2Q8N5K1 135 aaKnown RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 SGMS2Q8NHU3 365 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 NECAP2Q9NVZ3 263 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 CISD1Q9NZ45 108 aaKnown RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 THAP10Q9P2Z0 257 aaPredicted RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 FAM186AA6NE01 2351 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 CRYAAP02489 173 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 PSG1P11464 419 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 GP1BBP13224 206 aa12.73□□□□□ -0.37
PTPRA-201ENST00000216877 ZFP36L1Q07352 338 aaKnown RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
PTPRA-201ENST00000216877 DNAH14Q0VDD8 3507 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 HNRNPA2B1P22626 353 aaKnown RBP12.72□□□□□ -0.37
PTPRA-201ENST00000216877 KISS1Q15726 138 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ACTL10Q5JWF8 245 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 SPIN2AQ99865 258 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 SPIN2BQ9BPZ2 258 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 DUXBA0A1W2PPF3 345 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 GATAD1Q8WUU5 269 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ORAOV1Q8WV07 137 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 RTN4RQ9BZR6 473 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 S1PR5Q9H228 398 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF703Q9H7S9 590 aaPredicted RBP12.72□□□□□ -0.37
PTPRA-201ENST00000216877 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 PGPEP1LA6NFU8 196 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 SH2D1BO14796 132 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms