RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ARPC5LQ9BPX5 153 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 CABLES2Q9BTV7 478 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 SIRPB1O00241 398 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 MPPED1O15442 326 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 RCC1P18754 421 aaPredicted RBP25.13■■□□□ 1.61
PABPN1-201ENST00000216727 TBR1Q16650 682 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF497Q6ZNH5 498 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 LGI3Q8N145 548 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 RRNAD1Q96FB5 475 aaKnown RBP25.13■■□□□ 1.61
PABPN1-201ENST00000216727 C18orf12Q96KH6 178 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 OR5AC2Q9NZP5 309 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 DNAJB11Q9UBS4 358 aa25.13■■□□□ 1.61
PABPN1-201ENST00000216727 COMMD7Q86VX2 200 aa25.12■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF565Q8N9K5 539 aa25.12■■□□□ 1.61
PABPN1-201ENST00000216727 FZR1Q9UM11 496 aa25.12■■□□□ 1.61
PABPN1-201ENST00000216727 DSPP15924 2871 aaKnown RBP25.12■■□□□ 1.61
PABPN1-201ENST00000216727 RGS7BPQ6MZT1 257 aaPredicted RBP25.12■■□□□ 1.61
PABPN1-201ENST00000216727 Q8NA96 180 aa25.12■■□□□ 1.61
PABPN1-201ENST00000216727 MUCL1Q96DR8 90 aa25.12■■□□□ 1.61
PABPN1-201ENST00000216727 PHYHIPLQ96FC7 376 aa25.12■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF471Q9BX82 626 aaPredicted RBP25.12■■□□□ 1.61
PABPN1-201ENST00000216727 ACACAQ13085 2346 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 IGHV3-64DA0A0J9YX35 117 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 GPR31O00270 319 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 NUP62P37198 522 aaPredicted RBP25.11■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF83P51522 516 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 LUMP51884 338 aaPredicted RBP25.11■■□□□ 1.61
PABPN1-201ENST00000216727 PLPPR1Q8TBJ4 325 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 CNTNAP3BQ96NU0 1288 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 AQP10Q96PS8 301 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 CNTNAP3Q9BZ76 1288 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 MED9Q9NWA0 146 aa25.11■■□□□ 1.61
PABPN1-201ENST00000216727 C3orf85A0A1B0GTC6 90 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 NPIPB11E5RHQ5 1161 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 SRPXP78539 464 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 MZT1Q08AG7 82 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 SECTM1Q8WVN6 248 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 MSRB2Q9Y3D2 182 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 A8MXE2 369 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 PRRG2O14669 202 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 PHF1O43189 567 aaPredicted RBP25.1■■□□□ 1.61
PABPN1-201ENST00000216727 KCNAB3O43448 404 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 HAND1O96004 215 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 LMO1P25800 156 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 SLC5A7Q9GZV3 580 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 MSL2Q9HCI7 577 aa25.1■■□□□ 1.61
PABPN1-201ENST00000216727 FBXO9Q9UK97 447 aaPredicted RBP25.1■■□□□ 1.61
PABPN1-201ENST00000216727 IGKV1D-13A0A0B4J2D9 117 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 F5H0A9 414 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-201ENST00000216727 IGKV1-13P0DP09 117 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 WDR82Q6UXN9 313 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF818PQ6ZRF7 136 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 OR1S1Q8NH92 325 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 OR10J5Q8NHC4 309 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 TP53RKQ96S44 253 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 GLS2Q9UI32 602 aa25.09■■□□□ 1.61
PABPN1-201ENST00000216727 M0R1B8 84 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 S100A10P60903 97 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 NHLH1Q02575 133 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF826PQ6ZT77 177 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 LYZL2Q7Z4W2 148 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 DOLPP1Q86YN1 238 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 H1FOOQ8IZA3 346 aaPredicted RBP25.08■■□□□ 1.61
PABPN1-201ENST00000216727 SLC25A32Q9H2D1 315 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 HEATR1Q9H583 2144 aaKnown RBP25.08■■□□□ 1.61
PABPN1-201ENST00000216727 WIPI2Q9Y4P8 454 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 SPEF1Q9Y4P9 236 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 CRYAAP02489 173 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 ZNF250P15622 560 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 CISD2Q8N5K1 135 aaKnown RBP25.08■■□□□ 1.61
PABPN1-201ENST00000216727 STOML3Q8TAV4 291 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 TMEM222Q9H0R3 208 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 PIGMQ9H3S5 423 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 MBNL3Q9NUK0 354 aaKnown RBP25.08■■□□□ 1.61
PABPN1-201ENST00000216727 OR2W1Q9Y3N9 320 aa25.08■■□□□ 1.61
PABPN1-201ENST00000216727 TBC1D26Q86UD7 250 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 MARVELD3Q96A59 401 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 KIRREL1Q96J84 757 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 TAAR3PQ9P1P4 343 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 TMED3Q9Y3Q3 217 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 DCHS1Q96JQ0 3298 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 A6NLC8 198 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 PRAMEF6Q5VXH4 476 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 ACP7Q6ZNF0 438 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 LHFPL5Q8TAF8 219 aa25.07■■□□□ 1.6
PABPN1-201ENST00000216727 MSGN1A6NI15 193 aa25.06■■□□□ 1.6
PABPN1-201ENST00000216727 GLRXP35754 106 aa25.06■■□□□ 1.6
PABPN1-201ENST00000216727 NKX6-1P78426 367 aaPredicted RBP25.06■■□□□ 1.6
PABPN1-201ENST00000216727 PRR7Q8TB68 274 aa25.06■■□□□ 1.6
PABPN1-201ENST00000216727 TMEM56Q96MV1 263 aa25.06■■□□□ 1.6
PABPN1-201ENST00000216727 TRAPPC2LQ9UL33 140 aa25.06■■□□□ 1.6
PABPN1-201ENST00000216727 TMEM56-RWDD3S4R434 201 aa25.06■■□□□ 1.6
PABPN1-201ENST00000216727 DEDDO75618 318 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 PDZD9Q8IXQ8 264 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 CMTM1Q8IZ96 169 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 SHARPINQ9H0F6 387 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 OR14J1Q9UGF5 321 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 IGHV3-13P01766 116 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 BMP5P22003 454 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 SMCO1Q147U7 214 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms