RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 IL36GQ9NZH8 169 aa18.66■□□□□ 0.58
HOXC8-201ENST00000040584 RSU1Q15404 277 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 LRRC37A5PQ49AS3 106 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 ZNF573Q86YE8 665 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 STPG2Q8N412 459 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 SPERTQ8NA61 448 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 OR2Z1Q8NG97 314 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 FN3KRPQ9HA64 309 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 USP9XQ93008 2570 aaPredicted RBP18.65■□□□□ 0.58
HOXC8-201ENST00000040584 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.65■□□□□ 0.58
HOXC8-201ENST00000040584 GRPP07492 148 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 SERPINF1P36955 418 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 LUMP51884 338 aaPredicted RBP18.65■□□□□ 0.58
HOXC8-201ENST00000040584 SAXO1Q8IYX7 474 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 BATF2Q8N1L9 274 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 STOML3Q8TAV4 291 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 EMG1Q92979 244 aaKnown RBP18.65■□□□□ 0.58
HOXC8-201ENST00000040584 PECRQ9BY49 303 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 C5orf66Q9H5L9 145 aa18.65■□□□□ 0.58
HOXC8-201ENST00000040584 SYNGR1O43759 233 aa18.64■□□□□ 0.57
HOXC8-201ENST00000040584 BLVRBP30043 206 aaPredicted RBP18.64■□□□□ 0.57
HOXC8-201ENST00000040584 TMEM200AQ86VY9 491 aa18.64■□□□□ 0.57
HOXC8-201ENST00000040584 OR5AP2Q8NGF4 316 aa18.64■□□□□ 0.57
HOXC8-201ENST00000040584 LILRB1Q8NHL6 650 aaPredicted RBP18.64■□□□□ 0.57
HOXC8-201ENST00000040584 SLAMF9Q96A28 289 aa18.64■□□□□ 0.57
HOXC8-201ENST00000040584 CXXC4Q9H2H0 198 aa18.64■□□□□ 0.57
HOXC8-201ENST00000040584 TEX13DA0A0J9YY54 714 aaPredicted RBP18.63■□□□□ 0.57
HOXC8-201ENST00000040584 C13orf42A0A1B0GVH6 325 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 VSTM5A8MXK1 200 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 F5H0A9 414 aaPredicted RBP18.63■□□□□ 0.57
HOXC8-201ENST00000040584 SPRY3O43610 288 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 HTR3BO95264 441 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 SFTPBP07988 381 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 IGFBP2P18065 325 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 SNU13P55769 128 aaKnown RBP18.63■□□□□ 0.57
HOXC8-201ENST00000040584 ZNF154Q13106 437 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 UQCC3Q6UW78 93 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 CISD1Q9NZ45 108 aaKnown RBP18.63■□□□□ 0.57
HOXC8-201ENST00000040584 MBD2Q9UBB5 411 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 EDARQ9UNE0 448 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 UBR5O95071 2799 aaPredicted RBP18.63■□□□□ 0.57
HOXC8-201ENST00000040584 LRP5LA4QPB2 252 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 PET100P0DJ07 73 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 NPBWR2P48146 333 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 SRSF1Q07955 248 aaKnown RBP eCLIP18.63■□□□□ 0.57
HOXC8-201ENST00000040584 SLC38A6Q8IZM9 456 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 SCCPDHQ8NBX0 429 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 Q8NFD4 153 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 TMEM204Q9BSN7 226 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 ST6GALNAC5Q9BVH7 336 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 PKIBQ9C010 78 aa18.63■□□□□ 0.57
HOXC8-201ENST00000040584 DOPEY1Q5JWR5 2465 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 NUDT19A8MXV4 375 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 F8VVB4 439 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 F8VWA3 439 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 RHBDL1O75783 438 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 CSTBP04080 98 aaKnown RBP18.62■□□□□ 0.57
HOXC8-201ENST00000040584 LYL1P12980 280 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 TPT1P13693 172 aaKnown RBP18.62■□□□□ 0.57
HOXC8-201ENST00000040584 NPY4RP50391 375 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 CHRFAM7AQ494W8 412 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 CLEC18BQ6UXF7 455 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 FAM222BQ8WU58 562 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 Q96M66 194 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 TAS2R3Q9NYW6 316 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 MTCH1Q9NZJ7 389 aa18.62■□□□□ 0.57
HOXC8-201ENST00000040584 TMEM210A6NLX4 147 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 TEX46H3BTG2 121 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 CDIPTO14735 213 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 BCL3P20749 454 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 IL24Q13007 206 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 ZNF672Q499Z4 452 aaPredicted RBP18.61■□□□□ 0.57
HOXC8-201ENST00000040584 PRAMEF6Q5VXH4 476 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 MKXQ8IYA7 352 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 TMEM230Q96A57 120 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 MRPS24Q96EL2 167 aaKnown RBP18.61■□□□□ 0.57
HOXC8-201ENST00000040584 ZNF488Q96MN9 340 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 RTBDNQ9BSG5 229 aaPredicted RBP18.61■□□□□ 0.57
HOXC8-201ENST00000040584 WDR13Q9H1Z4 485 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 ABCA4P78363 2273 aa18.61■□□□□ 0.57
HOXC8-201ENST00000040584 J3QT63 122 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 APOBEC3AP31941 199 aaPredicted RBP18.6■□□□□ 0.57
HOXC8-201ENST00000040584 PRSS54Q6PEW0 395 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 DCUN1D4Q92564 292 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 BARX1Q9HBU1 254 aaPredicted RBP18.6■□□□□ 0.57
HOXC8-201ENST00000040584 PCDHB16Q9NRJ7 776 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 C14orf166Q9Y224 244 aaKnown RBP18.6■□□□□ 0.57
HOXC8-201ENST00000040584 RAB19A4D1S5 217 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 C3orf80F5H4A9 247 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 SPRNQ5BIV9 151 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 AADACL3Q5VUY0 350 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 ELP2Q6IA86 826 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 OSR2Q8N2R0 312 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 LHFPL5Q8TAF8 219 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 C2orf50Q96LR7 162 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 EHFQ9NZC4 300 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 DNAJB11Q9UBS4 358 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 HSF4Q9ULV5 492 aa18.6■□□□□ 0.57
HOXC8-201ENST00000040584 EIF5AP63241 154 aaKnown RBP18.59■□□□□ 0.57
HOXC8-201ENST00000040584 ATXN7L3Q14CW9 347 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms