RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 C1QL4Q86Z23 238 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM123Q8N131 208 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF610Q8N9Z0 462 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 PLEKHF2Q9H8W4 249 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 SLC7A10Q9NS82 523 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 WNT16Q9UBV4 365 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 DKKL1Q9UK85 242 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 WSB1Q9Y6I7 421 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 HSD17B6O14756 317 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNHIT1O43257 154 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 PDCD6O75340 191 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF32P17041 273 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 TCN2P20062 427 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 HNF1AP20823 631 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H3AP68431 136 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST2H3PS2Q5TEC6 136 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 Q6ZPA2 131 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 DEFB123Q8N688 67 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 NAT6Q93015 286 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 ALKBH3Q96Q83 286 aaPredicted RBP9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 NDUFAF3Q9BU61 184 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 DDA1Q9BW61 102 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 GLRX2Q9NS18 164 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 SH3BGRL2Q9UJC5 107 aa9.08□□□□□ -0.96
CX3CL1-201ENST00000006053 PROB1E7EW31 1015 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 HSPB6O14558 160 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 CCL3P10147 92 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 ERVFRD-1P60508 538 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 RPL23AP62750 156 aaKnown RBP9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 ELOBQ15370 118 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 KHDC3LQ587J8 217 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 SLC25A24Q6NUK1 477 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 FAM180AQ6UWF9 173 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 OR1F12Q8NHA8 337 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 HLA-CQ95604 372 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 YPEL4Q96NS1 127 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 NIPSNAP3BQ9BS92 247 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 SLC25A31Q9H0C2 315 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 KIAA1456Q9P272 454 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 C19orf25Q9UFG5 118 aaPredicted RBP9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 PI4KAP42356 2102 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 A0A0J9YW62 118 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 H3BP45 60 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 PITX3O75364 302 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 SCAF4O95104 1147 aaKnown RBP9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 EPHA1P21709 976 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 NPBWR2P48146 333 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF154Q13106 437 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 RAB35Q15286 201 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 FAM27BQ5VT28 67 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 PARD6GQ9BYG4 376 aaPredicted RBP9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM222Q9H0R3 208 aa9.07□□□□□ -0.96
CX3CL1-201ENST00000006053 A0A1B0GW64 132 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 A8MWP6 167 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SYNGR3O43761 229 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 CDS2O95674 445 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 TRGC2P03986 189 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 CRYGSP22914 178 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 UCP3P55916 312 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF92Q03936 586 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 ICAM4Q14773 271 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 C4orf17Q53FE4 359 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SLC25A26Q70HW3 274 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF100Q8IYN0 542 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 CMTM1Q8IZ96 169 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 ZIC4Q8N9L1 334 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SNIP1Q8TAD8 396 aaKnown RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 TVP23CQ96ET8 276 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 CDX2Q99626 313 aaPredicted RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SPIN2AQ99865 258 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SPIN2BQ9BPZ2 258 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 OR14J1Q9UGF5 321 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 HS3ST3B1Q9Y662 390 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 TCF21O43680 179 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 GDF9O60383 454 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 VAMP5O95183 116 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 FUT3P21217 361 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 FKBP2P26885 142 aaKnown RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 MAS1LP35410 378 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 RPS18P62269 152 aaKnown RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 MRPS34P82930 218 aaKnown RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 RIF1Q5UIP0 2472 aaKnown RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 CALHM1Q8IU99 346 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 NEK7Q8TDX7 302 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SNHG12Q9BXW3 62 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SRXN1Q9BYN0 137 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SMDT1Q9H4I9 107 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SEC14L6B5MCN3 397 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 CHST1O43916 411 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 S100A7P31151 101 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 NKX6-1P78426 367 aaPredicted RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 Q6ZSR3 168 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 FOXL2NBQ6ZUU3 175 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SELENOHQ8IZQ5 122 aaKnown RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 GAPTQ8N292 157 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 IL22RA1Q8N6P7 574 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 FSCN3Q9NQT6 498 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms