RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Slc18a3O35304 530 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 PkiaP63248 76 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Hand1Q64279 216 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr138Q7TRI7 312 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nmes1Q810Q5 83 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Flywch1Q8CI03 673 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1238Q8VG59 315 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr136Q8VG72 312 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem208Q9CR96 173 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Glipr2Q9CYL5 154 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm11756A2BEJ1 356 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Defa34D3Z0J0 93 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Oprk1P33534 380 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gpr143P70259 405 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gpank1Q61858 372 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Morn4Q6PGF2 146 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ubtd2Q6PGH0 234 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr527Q7TRT9 305 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 1810024B03RikQ8BWE1 200 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dusp7Q91Z46 422 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Crybb1Q9WVJ5 250 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1458A0A1L1SSD5 307 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ccl9P51670 122 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Adam26bQ6IMH6 699 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Lcn12Q6JVL5 193 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ndufv3Q8BK30 104 aaKnown RBP10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Elf5Q8VDK3 253 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr678Q8VG26 313 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr656Q8VGX9 329 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 D3Ertd254eA0A0G2JEM5 796 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm14295A2BG91 834 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r67G5E8C1 305 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm5571P01639 130 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr181Q8VGQ7 317 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nicn1Q9CQM0 213 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 GrinaQ9ESF4 345 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ceacam15A0A0B4J1L0 234 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Igkv17-121A0A0G2JFA8 117 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm13285B1AYI3 182 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm13275B1AYI8 182 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 9330182O14RikJ3QNB2 140 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r57K7N731 310 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 RrhO35214 337 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 IfnzQ8BQT1 182 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gprin3Q8BWS5 763 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm13278Q8CD73 182 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Znf281Q99LI5 893 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Xlr5cQ9JJR2 179 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dgat2l6A2ADU8 337 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 AamdcQ8R0P4 122 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r56Q9EPS9 310 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 MioxQ9QXN5 285 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Asah1Q9WV54 394 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Megf6Q80V70 1572 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gcm2O09102 504 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cdk5r1P61809 307 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dhrs9Q58NB6 319 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cpeb2Q812E0 521 aaKnown RBP10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Irf2bp1Q8R3Y8 584 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1143Q8VEU8 314 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Adipor1Q91VH1 375 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ighv1-78A0A0G2JGN3 117 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc7a15Q50E62 488 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Sf3a2Q62203 475 aaKnown RBP10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp874bQ7M6X2 447 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Prss42Q8VIF2 335 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Scn5aQ9JJV9 2019 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Trbv23A0A0A6YWQ1 115 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr196E9PYP4 309 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Susd1E9Q3H4 752 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Pax2P32114 414 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Drd1Q61616 446 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Reps2Q80XA6 521 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Hs3st3a1Q8BKN6 393 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mrgpra4Q91WW2 313 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zmat5Q9CQR5 170 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dicer1Q8R418 1916 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Alkal1J3QPP8 127 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tcstv1O70619 171 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Wfdc8Q4KUS1 273 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tox3Q80W03 575 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 ShfQ8CG80 238 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ntng2Q8R4F1 589 aaKnown RBP10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 TpbgQ9Z0L0 426 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fut9O88819 359 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Klk1b11P15946 261 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc16a11Q5NC32 447 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr10Q60883 311 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem147Q9CQG6 224 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Sval1Q9D2X6 151 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rbp2Q08652 134 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fam189bQ5HZJ5 669 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr107Q7TRK4 309 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 SheQ8BSD5 492 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Osr2Q91ZD1 312 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ttc9bQ9D6E4 239 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Egr3P43300 387 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 B020004J07RikQ3UTC0 476 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Q5SPV6 233 aa10.78□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem204Q7TQI0 226 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms