RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ARPC4P59998 168 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 ATXN7L3Q14CW9 347 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-232ENST00000641947 SMIM21Q3B7S5 101 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 BOLLQ8N9W6 283 aaKnown RBP14.77□□□□□ -0.05
PHGDH-232ENST00000641947 MARCH1Q8TCQ1 289 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF286AQ9HBT8 521 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 TMEM165Q9HC07 324 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 ING3Q9NXR8 418 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 DSCAML1Q8TD84 2053 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 IGKV1D-17A0A075B6S4 117 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 OR5H14A6NHG9 310 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 CCNKO75909 580 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 C1QL1O75973 258 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 HNRNPCP07910 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
PHGDH-232ENST00000641947 LMO1P25800 156 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 APOBEC3AP31941 199 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-232ENST00000641947 NPY4RP50391 375 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 FCN2Q15485 313 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF880Q6PDB4 577 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 Q6ZS49 121 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 TMED4Q7Z7H5 227 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 TERB2Q8NHR7 220 aa14.76□□□□□ -0.05
PHGDH-232ENST00000641947 CISD1Q9NZ45 108 aaKnown RBP14.76□□□□□ -0.05
PHGDH-232ENST00000641947 TRBV6-6A0A0A6YYG2 114 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 TRAV39A0A0B4J263 110 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 PRAF2O60831 178 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 CYB5R3P00387 301 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 IL5P05113 134 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 PSG2P11465 335 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 RCC1P18754 421 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 TNFSF4P23510 183 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 CD80P33681 288 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 TSPAN5P62079 268 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 RBM39Q14498 530 aaKnown RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 EFNB3Q15768 340 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF672Q499Z4 452 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 IGSF11Q5DX21 431 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 SHEQ5VZ18 495 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 FIP1L1Q6UN15 594 aaKnown RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF497Q6ZNH5 498 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 GAPTQ8N292 157 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 OR11H7Q8NGC8 314 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 PPP1R14BQ96C90 147 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 TMPRSS13Q9BYE2 586 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 CEACAM18A8MTB9 384 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 B8ZZF3 427 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 H3BUI4 141 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 SCTP09683 121 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 OR5H8P0DN80 308 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 COL10A1Q03692 680 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 BAMBIQ13145 260 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 HERPUD1Q15011 391 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 METTL11BQ5VVY1 283 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF843Q8N446 348 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 ADAD2Q8NCV1 583 aaKnown RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 Q8TCH9 128 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 DACT3Q96B18 629 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 RANGRFQ9HD47 186 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 RASL12Q9NYN1 266 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 WIPI2Q9Y4P8 454 aa14.75□□□□□ -0.05
PHGDH-232ENST00000641947 UTP20O75691 2785 aaKnown RBP14.75□□□□□ -0.05
PHGDH-232ENST00000641947 UBR5O95071 2799 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-232ENST00000641947 MYO18BQ8IUG5 2567 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 IGKV1-6A0A0C4DH72 117 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 CXCL3P19876 107 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 OR3A1P47881 315 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 CD83Q01151 205 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 GRK1Q15835 563 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 SRSF7Q16629 238 aaKnown RBP eCLIP14.74□□□□□ -0.05
PHGDH-232ENST00000641947 SWI5Q1ZZU3 235 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF626Q68DY1 528 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 ZDHHC22Q8N966 263 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 CCDC107Q8WV48 283 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 FYTTD1Q96QD9 318 aaKnown RBP14.74□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF2Q9BSG1 426 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-232ENST00000641947 SHARPINQ9H0F6 387 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 NECAP2Q9NVZ3 263 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 RNF7Q9UBF6 113 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF222Q9UK12 451 aa14.74□□□□□ -0.05
PHGDH-232ENST00000641947 KMT2BQ9UMN6 2715 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-232ENST00000641947 RNF224P0DH78 156 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 MDH2P40926 338 aaKnown RBP14.73□□□□□ -0.05
PHGDH-232ENST00000641947 UBE2MP61081 183 aaKnown RBP14.73□□□□□ -0.05
PHGDH-232ENST00000641947 PEG10Q86TG7 708 aaKnown RBP14.73□□□□□ -0.05
PHGDH-232ENST00000641947 COQ2Q96H96 371 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 MED30Q96HR3 178 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 DIRC2Q96SL1 478 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 DHRS9Q9BPW9 319 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 FXYD6Q9H0Q3 95 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 ALX4Q9H161 411 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-232ENST00000641947 MED28Q9H204 178 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 C5orf66Q9H5L9 145 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 RALYQ9UKM9 306 aaKnown RBP14.73□□□□□ -0.05
PHGDH-232ENST00000641947 GPR132Q9UNW8 380 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 PPP1R3CQ9UQK1 317 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 A0A1W2PPR1 153 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 VSTM5A8MXK1 200 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 B9A039 149 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 IFNL4K9M1U5 179 aa14.73□□□□□ -0.05
PHGDH-232ENST00000641947 ZNF737O75373 536 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms