RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 CNTNAP3BQ96NU0 1288 aa15.19■□□□□ 0.02
PHGDH-226ENST00000641756 LRFN3Q9BTN0 628 aa15.19■□□□□ 0.02
PHGDH-226ENST00000641756 CNTNAP3Q9BZ76 1288 aa15.19■□□□□ 0.02
PHGDH-226ENST00000641756 TINAGQ9UJW2 476 aa15.19■□□□□ 0.02
PHGDH-226ENST00000641756 FZR1Q9UM11 496 aa15.19■□□□□ 0.02
PHGDH-226ENST00000641756 ATP23Q9Y6H3 246 aa15.19■□□□□ 0.02
PHGDH-226ENST00000641756 GTF3C1Q12789 2109 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 CACNA1GO43497 2377 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 SIRPB1O00241 398 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 CECR9P0C854 216 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 RCC1P18754 421 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-226ENST00000641756 GNRHRP30968 328 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 OR8G1Q15617 311 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 SPIN3Q5JUX0 258 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 Q6P435 159 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 CCDC71LQ8N9Z2 235 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 MARVELD3Q96A59 401 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 MSI2Q96DH6 328 aaKnown RBP15.18■□□□□ 0.02
PHGDH-226ENST00000641756 TP53RKQ96S44 253 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 GPHA2Q96T91 129 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 SUCNR1Q9BXA5 334 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 CYTL1Q9NRR1 136 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 MED9Q9NWA0 146 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 LSM5Q9Y4Y9 91 aaKnown RBP15.18■□□□□ 0.02
PHGDH-226ENST00000641756 BOD1L1Q8NFC6 3051 aa15.18■□□□□ 0.02
PHGDH-226ENST00000641756 IGKV1D-13A0A0B4J2D9 117 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 KIR2DS1A0A191URI9 304 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 CGAP01215 116 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 IGKV1-13P0DP09 117 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 KIR2DS4P43632 304 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 SNTB1Q13884 538 aaKnown RBP15.17■□□□□ 0.02
PHGDH-226ENST00000641756 KIR2DS1Q14954 304 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 Q6ZS92 163 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 RPRMLQ8N4K4 120 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 LHFPL5Q8TAF8 219 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 TUBD1Q9UJT1 453 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 MEX3BQ6ZN04 569 aaKnown RBP15.17■□□□□ 0.02
PHGDH-226ENST00000641756 RBMXL3Q8N7X1 1067 aaKnown RBP15.17■□□□□ 0.02
PHGDH-226ENST00000641756 PHYHIPLQ96FC7 376 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 C18orf12Q96KH6 178 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 AQP10Q96PS8 301 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 ZNF71Q9NQZ8 489 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-226ENST00000641756 POLDIP2Q9Y2S7 368 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 CEP250Q9BV73 2442 aa15.17■□□□□ 0.02
PHGDH-226ENST00000641756 TRAV39A0A0B4J263 110 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 MBD3L4A6NDZ8 208 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 MBD3L3A6NE82 208 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 MBD3L5A6NJ08 208 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 HSD17B6O14756 317 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 MPPED1O15442 326 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 ERVK11-1P61568 191 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 ALKBH2Q6NS38 261 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 ZNF818PQ6ZRF7 136 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 ZNF565Q8N9K5 539 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 MBD3L2Q8NHZ7 208 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 LRRC20Q8TCA0 184 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 RIMS4Q9H426 269 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 GVINP1Q7Z2Y8 2422 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 C3orf85A0A1B0GTC6 90 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 LGALS8O00214 317 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 MLNRO43193 412 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 NXPH2O95156 264 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 OR2H2O95918 312 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 KCNJ3P48549 501 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 HOXA4Q00056 320 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 PAN3Q58A45 887 aaKnown RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 BHLHA15Q7RTS1 189 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 TBC1D26Q86UD7 250 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 LGI3Q8N145 548 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 GAPTQ8N292 157 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 GALNT11Q8NCW6 608 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 SNIP1Q8TAD8 396 aaKnown RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 BOD1Q96IK1 185 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 SLC5A7Q9GZV3 580 aa15.16■□□□□ 0.02
PHGDH-226ENST00000641756 PURGQ9UJV8 347 aaKnown RBP15.16■□□□□ 0.02
PHGDH-226ENST00000641756 DEDDO75618 318 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 SCO1O75880 301 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 PGA5P0DJD9 388 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 HKR1P10072 659 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 TPT1P13693 172 aaKnown RBP15.15■□□□□ 0.02
PHGDH-226ENST00000641756 FABP6P51161 128 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 ASCL5Q7RTU5 278 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 LRTM2Q8N967 370 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 STOML3Q8TAV4 291 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 PLPPR1Q8TBJ4 325 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 GTF3AQ92664 365 aaKnown RBP15.15■□□□□ 0.02
PHGDH-226ENST00000641756 LINC00052Q96N35 136 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 PRRX2Q99811 253 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 NRIP2Q9BQI9 281 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 SHARPINQ9H0F6 387 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 IFT22Q9H7X7 185 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 OR2S2Q9NQN1 319 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 ZC4H2Q9NQZ6 224 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 CCL28Q9NRJ3 127 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 TMEM100Q9NV29 134 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 DNAJB11Q9UBS4 358 aa15.15■□□□□ 0.02
PHGDH-226ENST00000641756 DSPP15924 2871 aaKnown RBP15.15■□□□□ 0.02
PHGDH-226ENST00000641756 IGHV1-18A0A0C4DH31 117 aa15.14■□□□□ 0.01
PHGDH-226ENST00000641756 H7C1Q1 480 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms