RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 RGS11O94810 467 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 INMTO95050 263 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 LGALS1P09382 135 aaKnown RBP6.12□□□□□ -1.43
SCARB2-226ENST00000640916 CALCBP10092 127 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 NFYBP25208 207 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 PTGFRP43088 359 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 NPBWR2P48146 333 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 MFGE8Q08431 387 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-226ENST00000640916 TSPAN31Q12999 210 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 MADCAM1Q13477 382 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 KPNB1Q14974 876 aaKnown RBP6.12□□□□□ -1.43
SCARB2-226ENST00000640916 CLVS2Q5SYC1 327 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 SLX4IPQ5VYV7 408 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 Q6ZSR3 168 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 SHFQ7M4L6 423 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 OR4D6Q8NGJ1 314 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 OTOSQ8NHW6 89 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 MYCBPQ99417 103 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-226ENST00000640916 CHCHD6Q9BRQ6 235 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 MED20Q9H944 212 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 RBFOX1Q9NWB1 397 aaKnown RBP6.12□□□□□ -1.43
SCARB2-226ENST00000640916 IL20Q9NYY1 176 aa6.12□□□□□ -1.43
SCARB2-226ENST00000640916 AMMECR1Q9Y4X0 333 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-226ENST00000640916 KBTBD11-OT1A0A1B0GTJ5 212 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 ODAMA1E959 279 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 ZNF729A6NN14 1252 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-226ENST00000640916 PRR32B1ATL7 298 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 ATP6V0E1O15342 81 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 SELENOFO60613 162 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 DHRS3O75911 302 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 NPPAP01160 153 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 TTRP02766 147 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 HSPB1P04792 205 aaKnown RBP6.11□□□□□ -1.43
SCARB2-226ENST00000640916 LYNP07948 512 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 OR5H8P0DN80 308 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 SOX6P35712 828 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 REG1BP48304 166 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 MECP2P51608 486 aaKnown RBP6.11□□□□□ -1.43
SCARB2-226ENST00000640916 BLVRAP53004 296 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 CBX1P83916 185 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 COQ5Q5HYK3 327 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 MOB3BQ86TA1 216 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-226ENST00000640916 OR14K1Q8NGZ2 314 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 OR2T10Q8NGZ9 312 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 CASTOR1Q8WTX7 329 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 THEM6Q8WUY1 208 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 STON2Q8WXE9 905 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 RASL11BQ9BPW5 248 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 PBOV1Q9GZY1 135 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 WFDC10AQ9H1F0 79 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 PPIL3Q9H2H8 161 aaKnown RBP6.11□□□□□ -1.43
SCARB2-226ENST00000640916 LINC00574Q9H8X3 128 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 SIGLEC8Q9NYZ4 499 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 CDH10Q9Y6N8 788 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 V9GYS6 101 aa6.11□□□□□ -1.43
SCARB2-226ENST00000640916 A0A0J9YWU9 116 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 A0A1B0GTI1 187 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 TMEM269A0A1B0GVZ9 245 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 A0A1W2PPE3 182 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 FAM230AA0A1W2PPH8 454 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 ACOD1A6NK06 481 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 SIRPB1O00241 398 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 HSD17B6O14756 317 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 MRASO14807 208 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 SRSF10O75494 262 aaKnown RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 OR2H2O95918 312 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 HNRNPCP07910 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 FASP25445 335 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 CD1BP29016 333 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 VHLP40337 213 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 GNG10P50151 68 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 HCCSP53701 268 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 UBE2V2Q15819 145 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 LINC00336Q6ZUF6 198 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 SLC25A26Q70HW3 274 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 GTSCR1Q86UQ5 136 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 SLC15A3Q8IY34 581 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 DEFB125Q8N687 156 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 HAVCR2Q8TDQ0 301 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 GNPDA2Q8TDQ7 276 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 EMG1Q92979 244 aaKnown RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 ELOVL1Q9BW60 279 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 OSBPL10Q9BXB5 764 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 CHCHD3Q9NX63 227 aaKnown RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 ZNF107Q9UII5 783 aaPredicted RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 MRPS28Q9Y2Q9 187 aaKnown RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 KLK5Q9Y337 293 aaPredicted RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 FBXO7Q9Y3I1 522 aa6.1□□□□□ -1.43
SCARB2-226ENST00000640916 FAM32AQ9Y421 112 aaKnown RBP6.1□□□□□ -1.43
SCARB2-226ENST00000640916 IGHV7-81A0A0B4J1V7 117 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 TRAV41A0A0B4J266 112 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 TRBV2A0A0J9YWF9 115 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 NPIPB11E5RHQ5 1161 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 H0Y980 276 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 GADD45GO95257 159 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 CNIH1O95406 144 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 MOSP00540 346 aa6.09□□□□□ -1.43
SCARB2-226ENST00000640916 IGHV3-11P01762 117 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms