RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 NAT1P18440 290 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 MDH2P40926 338 aaKnown RBP17.32■□□□□ 0.36
SCARB2-219ENST00000639738 GNG2P59768 71 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 RBM39Q14498 530 aaKnown RBP17.32■□□□□ 0.36
SCARB2-219ENST00000639738 RSBN1Q5VWQ0 802 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-219ENST00000639738 STEAP3Q658P3 488 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF497Q6ZNH5 498 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 TRAPPC6BQ86SZ2 158 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF561Q8N587 486 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF525Q8N782 197 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 GVQW1Q8N7I0 195 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 FAM216BQ8N7L0 139 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 ZFAND2BQ8WV99 257 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 CHST6Q9GZX3 395 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 CTSZQ9UBR2 303 aa17.32■□□□□ 0.36
SCARB2-219ENST00000639738 TRBV6-6A0A0A6YYG2 114 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 TK1P04183 234 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 GDNFP39905 211 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 ARFRP1Q13795 201 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 AVPI1Q5T686 147 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF880Q6PDB4 577 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 LYSMD2Q8IV50 215 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 OR8H2Q8N162 312 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
SCARB2-219ENST00000639738 CMSS1Q9BQ75 279 aaKnown RBP17.31■□□□□ 0.36
SCARB2-219ENST00000639738 MYOZ1Q9NP98 299 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-219ENST00000639738 ETAA1Q9NY74 926 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 NDUFA2O43678 99 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 MT-ND4P03905 459 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 KCNJ3P48549 501 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 SSBP1Q04837 148 aaKnown RBP17.31■□□□□ 0.36
SCARB2-219ENST00000639738 DCTN2Q13561 401 aaKnown RBP17.31■□□□□ 0.36
SCARB2-219ENST00000639738 FGFRL1Q8N441 504 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 SNAPC3Q92966 411 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 FAM234AQ9H0X4 552 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 PALMDQ9NP74 551 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 ABCB10Q9NRK6 738 aa17.31■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF230Q9UIE0 474 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-219ENST00000639738 IGKV1D-8A0A087WSZ0 117 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 ANKRD20A5PA0PJZ0 165 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 PLA2G10O15496 165 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 PPIHO43447 177 aaKnown RBP17.3■□□□□ 0.36
SCARB2-219ENST00000639738 SSX4O60224 188 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 RBBP9O75884 186 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 FCGR3AP08637 254 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 DTYMKP23919 212 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 ATP5J2P56134 94 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 IL13RA1P78552 427 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 KLF9Q13886 244 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-219ENST00000639738 ATXN7L3Q14CW9 347 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-219ENST00000639738 TMEM155Q4W5P6 130 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 SLC35E4Q6ICL7 350 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF841Q6ZN19 808 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 HOGA1Q86XE5 327 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 ASCC1Q8N9N2 400 aaKnown RBP17.3■□□□□ 0.36
SCARB2-219ENST00000639738 RAB1CQ92928 201 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 C12orf4Q9NQ89 552 aa17.3■□□□□ 0.36
SCARB2-219ENST00000639738 CEACAM18A8MTB9 384 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 MGST3O14880 152 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 AESQ08117 197 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 GRK1Q15835 563 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 Q6ZS49 121 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 PEG10Q86TG7 708 aaKnown RBP17.29■□□□□ 0.36
SCARB2-219ENST00000639738 MED30Q96HR3 178 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 BARX1Q9HBU1 254 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-219ENST00000639738 TBC1D24Q9ULP9 559 aa17.29■□□□□ 0.36
SCARB2-219ENST00000639738 POM121CA8CG34 1229 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 TMPRSS2O15393 492 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 CBX5P45973 191 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 KCNJ8Q15842 424 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 SRSF7Q16629 238 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCARB2-219ENST00000639738 MUC20Q8N307 709 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-219ENST00000639738 NEK7Q8TDX7 302 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 TIMD4Q96H15 378 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 RIMS4Q9H426 269 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-219ENST00000639738 Q9N2K0 584 aa17.28■□□□□ 0.36
SCARB2-219ENST00000639738 ZNF107Q9UII5 783 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-219ENST00000639738 VWC2LB2RUY7 222 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 F5H0A9 414 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-219ENST00000639738 ADAM20O43506 726 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 WNT2P09544 360 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 RCVRNP35243 200 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 GPR6P46095 362 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-219ENST00000639738 GLIPR1P48060 266 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 OR5D13Q8NGL4 314 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 C10orf105Q8TEF2 133 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 MAFIPQ8WZ33 124 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 MBD6Q96DN6 1003 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 PERPQ96FX8 193 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 NCOR1P1Q9H4R4 102 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 MBNL3Q9NUK0 354 aaKnown RBP17.27■□□□□ 0.36
SCARB2-219ENST00000639738 BEX4Q9NWD9 120 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-219ENST00000639738 KIAA2026Q5HYC2 2103 aa17.27■□□□□ 0.36
SCARB2-219ENST00000639738 VPS13CQ709C8 3753 aa17.27■□□□□ 0.35
SCARB2-219ENST00000639738 CELSR1Q9NYQ6 3014 aa17.27■□□□□ 0.35
SCARB2-219ENST00000639738 DOCK11Q5JSL3 2073 aa17.27■□□□□ 0.35
SCARB2-219ENST00000639738 NKX6-3A6NJ46 265 aa17.26■□□□□ 0.35
SCARB2-219ENST00000639738 FCER2P06734 321 aa17.26■□□□□ 0.35
SCARB2-219ENST00000639738 ERP29P30040 261 aaKnown RBP17.26■□□□□ 0.35
SCARB2-219ENST00000639738 PDLIM4P50479 330 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms