RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF154Q13106 437 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 OR2C3Q8N628 320 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 TMEM105Q8N8V8 129 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 HLA-CQ95604 372 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ARGFXA6NJG6 315 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 FGF5P12034 268 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 SULT1A1P50225 295 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 C18orf12Q96KH6 178 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 NOSIPQ9Y314 301 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 LIPGQ9Y5X9 500 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 A0A1W2PR80 420 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 MRPL33O75394 65 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 TMEM50AO95807 157 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 VAMP2P63027 116 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 TRIM61Q5EBN2 209 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 TUSC5Q8IXB3 177 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 MOB3AQ96BX8 217 aa12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-228ENST00000636610 LOC102723996A0A087X1L8 192 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF816-ZNF321PA0A0X1KG74 233 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 OR6C6A6NF89 314 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF732B4DXR9 585 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 H7C1Q1 480 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 WRBO00258 174 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 CST2P09228 141 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 SELEP16581 610 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 FUT6P51993 359 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 ACER2Q5QJU3 275 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 LINC00696Q6ZRV3 163 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 OR2V1Q8NHB1 315 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 RNASE11Q8TAA1 199 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF552Q9H707 407 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 GLRX2Q9NS18 164 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 PILRBQ9UKJ0 227 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 KLF2Q9Y5W3 355 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 LRRC3CA6NJW4 275 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 H0YL77 283 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 DTYMKP23919 212 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 DYNLT3P51808 116 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 PRDX4Q13162 271 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 IL11RAQ14626 422 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 SOHLH1Q5JUK2 328 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 RTL6Q6ICC9 239 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 C20orf204Q6ZNR8 217 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 SUCNR1Q9BXA5 334 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 C12orf49Q9H741 205 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 HSF4Q9ULV5 492 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 MED12LQ86YW9 2145 aa12.06□□□□□ -0.48
CACNA1A-228ENST00000636610 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 TMEM267Q0VDI3 215 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 SLC25A24Q6NUK1 477 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 DPPA2Q7Z7J5 298 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 SUMF2Q8NBJ7 301 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 HPSE2Q8WWQ2 592 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 BOD1Q96IK1 185 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 WDR54Q9H977 334 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 TRBV23-1A0A0A0MS06 115 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 CHST1O43916 411 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 TK1P04183 234 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 FKBP2P26885 142 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 FOXL2NBQ6ZUU3 175 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 CPT1CQ8TCG5 803 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 SPENQ96T58 3664 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 GJE1A6NN92 205 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 CNOT4O95628 575 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 SEC11BP0C7V7 166 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 ECI1P42126 302 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 MRPL21Q7Z2W9 205 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 TIPARPQ7Z3E1 657 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
CACNA1A-228ENST00000636610 USF3Q68DE3 2245 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 YIF1AO95070 293 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 RAB5AP20339 215 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 SRD5A2P31213 254 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 LRFN1Q9P244 771 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 RBM7Q9Y580 266 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 SPTBN2O15020 2390 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 IAPPP10997 89 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 CYB561P49447 251 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 PMS2CLQ68D20 193 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 TMEM252Q8N6L7 170 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 CCDC71LQ8N9Z2 235 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 M1APQ8TC57 530 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms