RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	NDUFA11	Q86Y39	141 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	NDNF	Q8TB73	568 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ZNF596	Q8TC21	504 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	RGP1	Q92546	391 aa	Predicted RBP	5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR5M11	Q96RB7	305 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	CITED2	Q99967	270 aa	Predicted RBP	5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	LIN7B	Q9HAP6	207 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ZNF286A	Q9HBT8	521 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	VCX3A	Q9NNX9	186 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	AMBN	Q9NP70	447 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	INPP5E	Q9NRR6	644 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	MRPS18A	Q9NVS2	196 aa	Known RBP	5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ERVK13-1	Q9NX77	482 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	DPM3	Q9P2X0	92 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	GMPPB	Q9Y5P6	360 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	STAB2	Q8WWQ8	2551 aa		5.85	□□□□□ -1.47
CACNA1A-222	ENST00000636022	TRAV24	A0A0B4J272	114 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	FAM172BP	A6NC97	362 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	TMEM212	A6NML5	194 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ZNF729	A6NN14	1252 aa	Predicted RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	LEUTX	A8MZ59	168 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	BUB1B-PAK6	H3BSN5	160 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	DEGS1	O15121	323 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	SULT1B1	O43704	296 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR2F2	O95006	317 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	FADS2	O95864	444 aa	Known RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PRB2	P02812	416 aa	Predicted RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	AMY1A	P04745	511 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	AMY2A	P04746	511 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OCM2	P0CE71	109 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OCM	P0CE72	109 aa	Predicted RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	TMEM225B	P0DP42	221 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ZNF44	P15621	663 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	BRS3	P32247	399 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	S100A5	P33763	92 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PTGFR	P43088	359 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PAX5	Q02548	391 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	SCN1B	Q07699	218 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	MRPL28	Q13084	256 aa	Known RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ATXN7L3	Q14CW9	347 aa	Predicted RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	HLA-DRB5	Q30154	266 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OXLD1	Q5BKU9	147 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	KRBOX4	Q5JUW0	171 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ZNF691	Q5VV52	312 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	FOXB2	Q5VYV0	432 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	ASCL4	Q6XD76	172 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	CCDC121	Q6ZUS5	278 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	SERPINA12	Q8IW75	414 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	WFDC9	Q8NEX5	89 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022		Q8NFD4	153 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PXT1	Q8NFP0	134 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR4F17	Q8NGA8	305 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR51T1	Q8NGJ9	327 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR52I1	Q8NGK6	324 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR5D14	Q8NGL3	314 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR5AK2	Q8NH90	309 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	APH1B	Q8WW43	257 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	R3HDM4	Q96D70	268 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	MRPL48	Q96GC5	212 aa	Known RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	KIRREL1	Q96J84	757 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022		Q96MT0	163 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	RBM14	Q96PK6	669 aa	Known RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	OR4F4	Q96R69	305 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PDCD1LG2	Q9BQ51	273 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PPIL3	Q9H2H8	161 aa	Known RBP	5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	NCOR1P1	Q9H4R4	102 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	LINC00574	Q9H8X3	128 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	NEK6	Q9HC98	313 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	PCDHGB5	Q9Y5G0	923 aa		5.84	□□□□□ -1.47
CACNA1A-222	ENST00000636022	KBTBD11-OT1	A0A1B0GTJ5	212 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LOC100130705	A0A1B0GUX0	176 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A18P	A6NE21	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A16P	A6NEW6	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A20P	A6NIJ5	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A9P	A6NNJ1	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A12P	A8MX19	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A5P	A8MXJ8	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022		H0YJX3	145 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022		H3BUI4	141 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GABRP	O00591	440 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	XPNPEP2	O43895	674 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MPZL2	O60487	215 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PEX14	O75381	377 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	WBP4	O75554	376 aa	Known RBP	5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ALDOB	P05062	364 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	HCK	P08631	526 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A15P	P0C7V4	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A13P	P0C7W8	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A14P	P0C7W9	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM90A24P	P0C7X0	464 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	S100A1	P23297	94 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MTNR1B	P49286	362 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GBX2	P52951	348 aa	Predicted RBP	5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PRRX1	P54821	245 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SMN1	Q16637	294 aa	Known RBP	5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TPTE2P1	Q5T6R2	138 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RSBN1	Q5VWQ0	802 aa	Predicted RBP	5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR5AU1	Q8NGC0	362 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR4D6	Q8NGJ1	314 aa		5.83	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR51A2	Q8NGJ7	313 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 62 ms