RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TMEM42Q69YG0 159 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 BRICD5Q6PL45 260 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 Q6ZS49 121 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 BEND4Q6ZU67 534 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 TMEM217Q8N7C4 229 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 P2RX4Q99571 388 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 MAGT1Q9H0U3 335 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 RALGAPA1Q6GYQ0 2036 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 A0A087WZY1 265 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 FGF7P21781 194 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 SRSF7Q16629 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 P4HA3Q7Z4N8 544 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 MAML2Q8IZL2 1156 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 RNASEH2CQ8TDP1 164 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 IL22RA2Q969J5 263 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 SIGLEC12Q96PQ1 595 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 HIST1H2BLQ99880 126 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 C2orf88Q9BSF0 95 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 CALHM2Q9HA72 323 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 GNG13Q9P2W3 67 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 MYO7BQ6PIF6 2116 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 KIAA0100Q14667 2235 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 IGKV1-12A0A0C4DH73 117 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 OR2J2O76002 312 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 IGKV1D-12P01611 117 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 TK1P04183 234 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 RNF224P0DH78 156 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 BCL2P10415 239 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 UCP1P25874 307 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 RBM11P57052 281 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 OR2AE1Q8NHA4 323 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 SPACA9Q96E40 222 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 TECTBQ96PL2 329 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 SLC7A10Q9NS82 523 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 CLEC1BQ9P126 229 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 NCOA6Q14686 2063 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 C9J4A7 227 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 EPHA1P21709 976 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 IL2RGP31785 369 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 JOSD1Q15040 202 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 NKAIN1Q4KMZ8 207 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 SLC25A24Q6NUK1 477 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 ODF3L1Q8IXM7 274 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 ZNF385AQ96PM9 386 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 CABLES2Q9BTV7 478 aa12.78□□□□□ -0.36
CACNA1A-220ENST00000635988 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 PHOX2AO14813 284 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 CHST1O43916 411 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 NPBWR2P48146 333 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 RAB4BP61018 213 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 ACSF3Q4G176 576 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 NOL4LQ96MY1 436 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 SSX3Q99909 188 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 PRO1933Q9H354 126 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 CDH20Q9HBT6 801 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 SDF2L1Q9HCN8 221 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 IGHV1OR15-9A0A0B4J2B8 117 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 TP53I11O14683 189 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 SYNGR3O43761 229 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 TMEM50AO95807 157 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 LCATP04180 440 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 CEACAM6P40199 344 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF154Q13106 437 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 SSX2Q16385 188 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 OR1F12Q8NHA8 337 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 OR2V1Q8NHB1 315 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 RAB24Q969Q5 203 aa12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A10PA6NDY2 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A18PA6NE21 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A16PA6NEW6 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A20PA6NIJ5 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A8PA6NJQ4 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A7PA6NKC0 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A22PA8MWA6 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A12PA8MX19 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A5PA8MXJ8 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A23PA8MXZ1 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A15PP0C7V4 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A13PP0C7W8 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A14PP0C7W9 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FAM90A24PP0C7X0 464 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 WDR74Q6RFH5 385 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 OR10A7Q8NGE5 316 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 OR5D13Q8NGL4 314 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 MBD3L1Q8WWY6 194 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 LRFN1Q9P244 771 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 FER1L5A0AVI2 2057 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 OR7C1O76099 320 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms