RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FAM180AQ6UWF9 173 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 LIAT1Q6ZQX7 453 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SSX8Q7RTT4 187 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 DOLPP1Q86YN1 238 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SPACA3Q8IXA5 215 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 OR8H3Q8N146 312 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 CCDC71LQ8N9Z2 235 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 INO80EQ8NBZ0 244 aaPredicted RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 NAXEQ8NCW5 288 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 OR4A4PQ8NGN8 299 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 LILRB1Q8NHL6 650 aaPredicted RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 PRR7Q8TB68 274 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 MRPL30Q8TCC3 161 aaKnown RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 SCARB1Q8WTV0 552 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 RTN4IP1Q8WWV3 396 aaPredicted RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 DYRK2Q92630 601 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 MARVELD3Q96A59 401 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ABHD17AQ96GS6 310 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 CCDC120Q96HB5 630 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 C18orf12Q96KH6 178 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 OR10C1Q96KK4 312 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ZNF488Q96MN9 340 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ADAT1Q9BUB4 502 aaKnown RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 SCNM1Q9BWG6 230 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 C1QTNF6Q9BXI9 259 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PIGMQ9H3S5 423 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 TMEM165Q9HC07 324 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ZFP57Q9NU63 452 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 RASL12Q9NYN1 266 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 RDH8Q9NYR8 311 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 GLS2Q9UI32 602 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 TUBD1Q9UJT1 453 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ZNF835Q9Y2P0 537 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 MEMO1Q9Y316 297 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 WIPI2Q9Y4P8 454 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SPEF1Q9Y4P9 236 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PRR14LQ5THK1 2151 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 DMXL1Q9Y485 3027 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 IGKV1-6A0A0C4DH72 117 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 KANTRA0A1W2PQU2 76 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 RNF222A6NCQ9 220 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 LEUTXA8MZ59 168 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 H0YIZ8 118 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 H0YL77 283 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 IFNL4K9M1U5 179 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 GPR31O00270 319 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 SLC33A1O00400 549 aaPredicted RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 PRRG2O14669 202 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 CDIPTO14735 213 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 HS3ST1O14792 307 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 MLNRO43193 412 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 BCL2L11O43521 198 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 ADAP1O75689 374 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 OR2H2O95918 312 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 IGHV3-13P01766 116 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 GRPP07492 148 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 HOXB5P09067 269 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 DUSP1P28562 367 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 CD200P41217 278 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 FABP6P51161 128 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 AP2S1P53680 142 aaPredicted RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 UBA52P62987 128 aaKnown RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 NKX6-1P78426 367 aaPredicted RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 SRPXP78539 464 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 NAAAQ02083 359 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 HERPUD1Q15011 391 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 RGS7BPQ6MZT1 257 aaPredicted RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 FIP1L1Q6UN15 594 aaKnown RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 ZNF497Q6ZNH5 498 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 C20orf204Q6ZNR8 217 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 MOB1BQ7L9L4 216 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 LGI3Q8N145 548 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 BATF2Q8N1L9 274 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 Q8NA96 180 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 OR10Z1Q8NGY1 313 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 GLYATL2Q8WU03 294 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 TOMM40LQ969M1 308 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 MSI2Q96DH6 328 aaKnown RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 MUCL1Q96DR8 90 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 PHYHIPLQ96FC7 376 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 TMEM56Q96MV1 263 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 CNTNAP3BQ96NU0 1288 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 AQP10Q96PS8 301 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 CABLES2Q9BTV7 478 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 CNTNAP3Q9BZ76 1288 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 TOLLIPQ9H0E2 274 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 SLC25A32Q9H2D1 315 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 SLC2A9Q9NRM0 540 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 MBNL3Q9NUK0 354 aaKnown RBP4.71□□□□□ -1.66
NEK3-211ENST00000629912 ELOVL5Q9NYP7 299 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 IL36RNQ9UBH0 155 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 TINAGQ9UJW2 476 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 TMED3Q9Y3Q3 217 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 TMEM56-RWDD3S4R434 201 aa4.71□□□□□ -1.66
NEK3-211ENST00000629912 ZGRF1Q86YA3 2104 aa4.7□□□□□ -1.66
NEK3-211ENST00000629912 PRRC2CQ9Y520 2896 aaKnown RBP4.7□□□□□ -1.66
NEK3-211ENST00000629912 PIGBOS1A0A0B4J2F0 54 aa4.7□□□□□ -1.66
NEK3-211ENST00000629912 C3orf85A0A1B0GTC6 90 aa4.7□□□□□ -1.66
NEK3-211ENST00000629912 DUXBA0A1W2PPF3 345 aa4.7□□□□□ -1.66
NEK3-211ENST00000629912 MPTX1A8MV57 137 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms