RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FBXW9Q5XUX1 488 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 SPRED2Q7Z698 418 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 PDPNQ86YL7 162 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 RNF2Q99496 336 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 NPTNQ9Y639 398 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 V9GYH0 126 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 TRAV8-7A0A075B6U6 113 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 HPXP02790 462 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCN8A-209ENST00000627620 INO80CQ6PI98 192 aaPredicted RBP11.23□□□□□ -0.61
SCN8A-209ENST00000627620 GMPPAQ96IJ6 420 aaPredicted RBP11.23□□□□□ -0.61
SCN8A-209ENST00000627620 NEURL1O76050 574 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 VDAC1P21796 283 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 INPP5JQ15735 1006 aaPredicted RBP11.23□□□□□ -0.61
SCN8A-209ENST00000627620 MPV17LQ2QL34 196 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 RASL11BQ9BPW5 248 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 TECRQ9NZ01 308 aaKnown RBP11.23□□□□□ -0.61
SCN8A-209ENST00000627620 J3QR89 54 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 RGS13O14921 159 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 OR5A2Q8NGI9 324 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 GNG7O60262 68 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF154Q13106 437 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 ASCL5Q7RTU5 278 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 TGIF2LYQ8IUE0 185 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 SLC26A10Q8NG04 563 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 TTTY12Q9BZ98 90 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
SCN8A-209ENST00000627620 RBFOX3A6NFN3 312 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 NHLH1Q02575 133 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 NHLH2Q02577 135 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
SCN8A-209ENST00000627620 C16orf97H3BN30 126 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 CAMPP49913 170 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 FOXL2P58012 376 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 HLA-DRB3P79483 266 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 MGAT2Q10469 447 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 OR10A7Q8NGE5 316 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
SCN8A-209ENST00000627620 MIXL1Q9H2W2 232 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 MSL2Q9HCI7 577 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 SLC7A10Q9NS82 523 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 C1RLQ9NZP8 487 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 DNPH1O43598 174 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 CRHP06850 196 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 USF1P22415 310 aaPredicted RBP11.22□□□□□ -0.61
SCN8A-209ENST00000627620 SLC23A3Q6PIS1 610 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 MDP1Q86V88 176 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 CHST5Q9GZS9 411 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 HEXA-AS1Q9H8Q6 139 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 LPAR3Q9UBY5 353 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 TRAV39A0A0B4J263 110 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
SCN8A-209ENST00000627620 OR10D4PQ8NGN7 298 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 IGHV3OR15-7A0A075B7D8 119 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 CENPVL1A0A0U1RR11 272 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 OR5AL1P0C617 328 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 ACAA2P42765 397 aaKnown RBP11.22□□□□□ -0.61
SCN8A-209ENST00000627620 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 MRPL24Q96A35 216 aaKnown RBP11.22□□□□□ -0.61
SCN8A-209ENST00000627620 SLC2A9Q9NRM0 540 aa11.22□□□□□ -0.61
SCN8A-209ENST00000627620 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 INSIG2Q9Y5U4 225 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 TMEM210A6NLX4 147 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 MMP16P51512 607 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 DYRK2Q92630 601 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF501Q96CX3 271 aaPredicted RBP11.21□□□□□ -0.61
SCN8A-209ENST00000627620 GPA33Q99795 319 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 VPS25Q9BRG1 176 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 OR2W1Q9Y3N9 320 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 LIPGQ9Y5X9 500 aa11.21□□□□□ -0.61
SCN8A-209ENST00000627620 IGKV1D-16P01601 117 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 SCGB1C2P0DMR2 95 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 PMS2CLQ68D20 193 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 FLYWCH2Q96CP2 140 aaKnown RBP11.21□□□□□ -0.62
SCN8A-209ENST00000627620 ADAT3Q96EY9 351 aaPredicted RBP11.21□□□□□ -0.62
SCN8A-209ENST00000627620 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 ACP1P24666 158 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 MESP2Q0VG99 397 aa11.21□□□□□ -0.62
SCN8A-209ENST00000627620 PSG5Q15238 335 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 ZNF441Q8N8Z8 693 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 OR4P4Q8NGL7 312 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 PCDHGA9Q9Y5G4 932 aaKnown RBP11.2□□□□□ -0.62
SCN8A-209ENST00000627620 G6PCP35575 357 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 OR5R1Q8NH85 324 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 ZPLD1Q8TCW7 415 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 MRGPRFQ96AM1 343 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 RNF122Q9H9V4 155 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 ZNF107Q9UII5 783 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms