RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GRPP07492 148 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 SFTPCP11686 197 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 BMP5P22003 454 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 PSMB6P28072 239 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 ZNF83P51522 516 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 BAMBIQ13145 260 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 BRICD5Q6PL45 260 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 NUP37Q8NFH4 326 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 PPP1R1CQ8WVI7 109 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 RTN4IP1Q8WWV3 396 aaPredicted RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 SNRNP40Q96DI7 357 aaKnown RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 VKORC1Q9BQB6 163 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 JKAMPQ9P055 326 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 UBQLN2Q9UHD9 624 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 TINAGQ9UJW2 476 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 FBXO9Q9UK97 447 aaPredicted RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 FREM2Q5SZK8 3169 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 DMXL1Q9Y485 3027 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 FAM25EA8MYX2 175 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 MLNRO43193 412 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 SERPINF1P36955 418 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 NUP62P37198 522 aaPredicted RBP13.87□□□□□ -0.19
LDB3-208ENST00000623007 RAB14P61106 215 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 NKX6-1P78426 367 aaPredicted RBP13.87□□□□□ -0.19
LDB3-208ENST00000623007 SLC9A3R2Q15599 337 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 CMTM1Q8IZ96 169 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 INO80EQ8NBZ0 244 aaPredicted RBP13.87□□□□□ -0.19
LDB3-208ENST00000623007 ZNF680Q8NEM1 530 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 OR5T2Q8NGG2 359 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 LILRB4Q8NHJ6 448 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 MRPL30Q8TCC3 161 aaKnown RBP13.87□□□□□ -0.19
LDB3-208ENST00000623007 KIRREL1Q96J84 757 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 CABLES2Q9BTV7 478 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 TMEM165Q9HC07 324 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
LDB3-208ENST00000623007 IGLV3-9A0A075B6K5 115 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 A0A0G2JNJ9 132 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 FAM221AA4D161 298 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 A6NLC8 198 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 C1QTNF9BB2RNN3 333 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 HS3ST1O14792 307 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 OR2H2O95918 312 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 PAX5Q02548 391 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 PDCD1Q15116 288 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 TRAT1Q6PIZ9 186 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 ACOT7LQ6ZUV0 252 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 TMUB2Q71RG4 321 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 LGI3Q8N145 548 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 RPRMLQ8N4K4 120 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 PPP1R35Q8TAP8 253 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 DYRK2Q92630 601 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 RND1Q92730 232 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 RDH5Q92781 318 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 TOMM40LQ969M1 308 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 ERGIC1Q969X5 290 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 HEXA-AS1Q9H8Q6 139 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 SLC2A9Q9NRM0 540 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 TAAR3PQ9P1P4 343 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 Q9UFV3 132 aa13.86□□□□□ -0.19
LDB3-208ENST00000623007 DUXBA0A1W2PPF3 345 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 SLC33A1O00400 549 aaPredicted RBP13.85□□□□□ -0.19
LDB3-208ENST00000623007 TUSC2O75896 110 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 HAND1O96004 215 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 TNFSF4P23510 183 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 KLRB1Q12918 225 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 ALKBH6Q3KRA9 238 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 ZNF497Q6ZNH5 498 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 SLC51BQ86UW2 128 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 FAM216AQ8WUB2 273 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 WDR89Q96FK6 387 aaPredicted RBP13.85□□□□□ -0.19
LDB3-208ENST00000623007 DIRC2Q96SL1 478 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 ARL6Q9H0F7 186 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 KCNIP1Q9NZI2 227 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 ZDHHC8Q9ULC8 765 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 TNFSF18Q9UNG2 199 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 TRBV6-7A0A0A0MS04 114 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 C13orf42A0A1B0GVH6 325 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 GPR31O00270 319 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 MPC2O95563 127 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 CXCL2P19875 107 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 AADACP22760 399 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 SLC35E4Q6ICL7 350 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 WDR82Q6UXN9 313 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 ACP7Q6ZNF0 438 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 ZNF488Q96MN9 340 aa13.85□□□□□ -0.19
LDB3-208ENST00000623007 MBNL3Q9NUK0 354 aaKnown RBP13.85□□□□□ -0.19
LDB3-208ENST00000623007 TRAV14DV4A0A0A6YYC5 116 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 KANTRA0A1W2PQU2 76 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 TMEM30CPA0ZSE6 113 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 WNT2P09544 360 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 PI3P19957 117 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 CD40P25942 277 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 DUSP1P28562 367 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 GATA4P43694 442 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 AP2S1P53680 142 aaPredicted RBP13.84□□□□□ -0.19
LDB3-208ENST00000623007 FXYD4P59646 89 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms