RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 APELAP0DMC3 54 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 PF4V1P10720 104 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ADRA2CP18825 462 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 KITLGP21583 273 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 GRNP28799 593 aaKnown RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SRPXP78539 464 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 FAM3AP98173 230 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SPAG16Q8N0X2 631 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 TMEM123Q8N131 208 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 LGI3Q8N145 548 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF843Q8N446 348 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF525Q8N782 197 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 RANBP3Q9H6Z4 567 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 COA4Q9NYJ1 87 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 FAM215AQ9Y5M1 114 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 WNT9BO14905 357 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 LMX1BO60663 402 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 TPPPO94811 219 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ACSM1Q08AH1 577 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 C17orf107Q6ZR85 190 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 LRP11Q86VZ4 500 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 FAM216BQ8N7L0 139 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ISYNA1Q9NPH2 558 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 EXOGQ9Y2C4 368 aaKnown RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SLC25A15Q9Y619 301 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 CRYM-AS1A6NIL9 109 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 J3QW42 95 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 NPIPB7O75200 414 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 PF4P02776 101 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF154Q13106 437 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 MPPED2Q15777 294 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 LINC00303Q3SY05 128 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 OR8G2PQ6IF36 304 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF770Q6IQ21 691 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 CENPVQ7Z7K6 275 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ZIC4Q8N9L1 334 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 OR52I2Q8NH67 350 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SLC35E1Q96K37 410 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 ADGRG7Q96K78 797 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 PRR14LQ5THK1 2151 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 GOSR2O14653 212 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 CEACAM4O75871 244 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 IGF2P01344 180 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SRD5A1P18405 259 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 CRYGSP22914 178 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 HRH1P35367 487 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SLC35B1P78383 322 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 CYCSP99999 105 aaKnown RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 C12orf45Q8N5I9 185 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-229ENST00000622668 OR51S1Q8NGJ8 323 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 OR56B4Q8NH76 319 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 SMIM3Q9BZL3 60 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 HIF1ANQ9NWT6 349 aa7.78□□□□□ -1.16
HDAC9-229ENST00000622668 B3GALT5-AS1P59052 145 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 PRB3Q04118 309 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-229ENST00000622668 MPV17LQ2QL34 196 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 RFLNBQ8N5W9 214 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 POM121L2Q96KW2 1035 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 KCNK15Q9H427 330 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC9-229ENST00000622668 PTHLHP12272 177 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 MUC1P15941 1255 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-229ENST00000622668 Q56UQ5 140 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 SUMF2Q8NBJ7 301 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 SNX22Q96L94 193 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 TMPRSS13Q9BYE2 586 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 SPRY4Q9C004 299 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 BPESC1Q9GZL8 116 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 IGKV3-7A0A075B6H7 116 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 A0A1W2PPV4 95 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 A8MV72 311 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-229ENST00000622668 MED6O75586 246 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 HIST1H1DP16402 221 aaKnown RBP7.77□□□□□ -1.17
HDAC9-229ENST00000622668 PMELP40967 661 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 GAS1P54826 345 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 RBMS2Q15434 407 aaKnown RBP7.77□□□□□ -1.17
HDAC9-229ENST00000622668 C11orf44Q8N8P7 122 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 SCPEP1Q9HB40 452 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 PARP11Q9NR21 331 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 THYN1Q9P016 225 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 ATPIF1Q9UII2 106 aa7.77□□□□□ -1.17
HDAC9-229ENST00000622668 B4DSR2 109 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 OR2F2O95006 317 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 HPXP02790 462 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 CEACAM8P31997 349 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-229ENST00000622668 DCTDP32321 178 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 PPP1CCP36873 323 aaKnown RBP7.76□□□□□ -1.17
HDAC9-229ENST00000622668 RAP2BP61225 183 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 MAB21L1Q13394 359 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 NRN1LQ496H8 165 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 FAM122BQ7Z309 247 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 OR4S1Q8NGB4 309 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 RTN4IP1Q8WWV3 396 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-229ENST00000622668 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 TSNAXQ99598 290 aaKnown RBP7.76□□□□□ -1.17
HDAC9-229ENST00000622668 RPH3ALQ9UNE2 315 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 ZNF835Q9Y2P0 537 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 FBXO7Q9Y3I1 522 aa7.76□□□□□ -1.17
HDAC9-229ENST00000622668 HELZP42694 1942 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms